Cornell University College of Veterinary Medicine, Ithaca, NY, USA.
Bioinfo Solutions LLC, Parker, CO, USA.
J Neuroinflammation. 2018 Jun 15;15(1):185. doi: 10.1186/s12974-018-1219-0.
Macrophages play a key role in peripheral nerve repair and demonstrate complex phenotypes that are highly dependent on microenvironmental cues.
We determined temporal changes in macrophage gene expression over time using RNA sequencing after fluorescence-activated cell sorting (FACS) macrophage populations from injured peripheral nerve. We identified key upstream regulators and dominant pathways using ingenuity pathway analysis and confirmed these changes with NanoString technology. We then investigate the effects of extreme polarizers of macrophage phenotype (IL4 and IFNγ) on nerve regeneration. We determined macrophage gene expression in vivo at the site of peripheral nerve injury with NanoString technology, and assessed recovery from sciatic nerve injury by cranial tibial muscle weights and retrograde labeling motor neurons in mice with deletion of IL4 or IFNγ receptors.
We demonstrate that IL4R and IFNγR deletions provide complementary responses to polarization, and alter expression of genes associated with angiogenesis and axonal extension, but do not influence recovery from peripheral nerve transection at 8 weeks after repair.
Overall, this study provides a framework to evaluate the phenotype of macrophages over time, and provides a broader and more precise assessment of gene expression changes than has previously been commonly used. This data suggests ways in which polarization may be modulated to improve repair.
巨噬细胞在外周神经修复中起着关键作用,表现出复杂的表型,这些表型高度依赖于微环境线索。
我们通过荧光激活细胞分选(FACS)从损伤的周围神经中分离巨噬细胞群体,使用 RNA 测序确定巨噬细胞基因表达随时间的变化。我们使用 ingenuity 通路分析确定关键的上游调节因子和主要通路,并使用 NanoString 技术验证这些变化。然后,我们研究了巨噬细胞表型的极端极化剂(IL4 和 IFNγ)对神经再生的影响。我们使用 NanoString 技术在周围神经损伤部位测定巨噬细胞基因表达,并通过坐骨神经损伤小鼠颅神经肌重量和逆行标记运动神经元来评估恢复情况,这些小鼠缺失了 IL4 或 IFNγ 受体。
我们证明,IL4R 和 IFNγR 的缺失提供了极化的互补反应,并改变了与血管生成和轴突延伸相关的基因表达,但在修复后 8 周时,并不影响周围神经横断后的恢复。
总的来说,这项研究提供了一个随时间评估巨噬细胞表型的框架,并提供了比以前常用方法更广泛和更精确的基因表达变化评估。这些数据表明,极化可以通过调节来改善修复。