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阵发性睡眠性血红蛋白尿症的进化动力学。

Evolutionary dynamics of paroxysmal nocturnal hemoglobinuria.

机构信息

Interuniversity Institute of Bioinformatics in Brussels, ULB-VUB, Brussels, Belgium.

MLG, Département d'Informatique, Université Libre de Bruxelles, Brussels, Belgium.

出版信息

PLoS Comput Biol. 2018 Jun 18;14(6):e1006133. doi: 10.1371/journal.pcbi.1006133. eCollection 2018 Jun.

Abstract

Paroxysmal nocturnal hemoglobinuria (PNH) is an acquired clonal blood disorder characterized by hemolysis and a high risk of thrombosis, that is due to a deficiency in several cell surface proteins that prevent complement activation. Its origin has been traced to a somatic mutation in the PIG-A gene within hematopoietic stem cells (HSC). However, to date the question of how this mutant clone expands in size to contribute significantly to hematopoiesis remains under debate. One hypothesis posits the existence of a selective advantage of PIG-A mutated cells due to an immune mediated attack on normal HSC, but the evidence supporting this hypothesis is inconclusive. An alternative (and simpler) explanation attributes clonal expansion to neutral drift, in which case selection neither favours nor inhibits expansion of PIG-A mutated HSC. Here we examine the implications of the neutral drift model by numerically evolving a Markov chain for the probabilities of all possible outcomes, and investigate the possible occurrence and evolution, within this framework, of multiple independently arising clones within the HSC pool. Predictions of the model agree well with the known incidence of the disease and average age at diagnosis. Notwithstanding the slight difference in clonal expansion rates between our results and those reported in the literature, our model results lead to a relative stability of clone size when averaging multiple cases, in accord with what has been observed in human trials. The probability of a patient harbouring a second clone in the HSC pool was found to be extremely low ([Formula: see text]). Thus our results suggest that in clinical cases of PNH where two independent clones of mutant cells are observed, only one of those is likely to have originated in the HSC pool.

摘要

阵发性睡眠性血红蛋白尿症(PNH)是一种获得性克隆性血液疾病,其特征为溶血和高血栓形成风险,这是由于几种细胞表面蛋白的缺乏导致补体激活。其起源可追溯至造血干细胞(HSC)中 PIG-A 基因的体细胞突变。然而,迄今为止,关于该突变克隆如何扩大规模以对造血产生重大影响的问题仍存在争议。一种假说假设 PIG-A 突变细胞存在选择性优势,因为免疫系统攻击正常 HSC,但支持该假说的证据尚无定论。另一种(更简单)的解释归因于克隆扩展的中性漂移,在这种情况下,选择既不有利于也不抑制 PIG-A 突变 HSC 的扩展。在这里,我们通过数值演化一个马尔可夫链来检查中性漂移模型的含义,以研究所有可能结果的概率,并在该框架内研究 HSC 池内多个独立出现的克隆的可能发生和演变。该模型的预测与该疾病的已知发病率和平均诊断年龄非常吻合。尽管我们的结果与文献报道的克隆扩展率略有差异,但我们的模型结果导致在平均多个病例时克隆大小相对稳定,这与人类试验中观察到的情况一致。发现患者 HSC 池中有第二个克隆的概率极低([公式:见文本])。因此,我们的结果表明,在 PNH 的临床病例中,如果观察到两个独立的突变细胞克隆,其中只有一个可能起源于 HSC 池。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c7c9/6023248/ea4a72c8654a/pcbi.1006133.g001.jpg

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