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海星消耗性疾病导致的物种灭绝和关键物种的快速遗传变化。

Decimation by sea star wasting disease and rapid genetic change in a keystone species, .

机构信息

School of Natural Sciences, University of California, Merced, CA 95343;

Department of Biological Sciences, University of Rhode Island, Kingston, RI 02881.

出版信息

Proc Natl Acad Sci U S A. 2018 Jul 3;115(27):7069-7074. doi: 10.1073/pnas.1800285115. Epub 2018 Jun 18.

Abstract

Standing genetic variation enables or restricts a population's capacity to respond to changing conditions, including the extreme disturbances expected to increase in frequency and intensity with continuing anthropogenic climate change. However, we know little about how populations might respond to extreme events with rapid genetic shifts, or how population dynamics may influence and be influenced by population genomic change. We use a range-wide epizootic, sea star wasting disease, that onset in mid-2013 and caused mass mortality in to explore how a keystone marine species responded to an extreme perturbation. We integrated field surveys with restriction site-associated DNA sequencing data to () describe the population dynamics of mortality and recovery, and () compare allele frequencies in mature before the disease outbreak with allele frequencies in adults and new juveniles after the outbreak, to identify whether selection may have occurred. We found suffered 81% mortality in the study region between 2012 and 2015, and experienced a concurrent 74-fold increase in recruitment beginning in late 2013. Comparison of pre- and postoutbreak adults revealed significant allele frequency changes at three loci, which showed consistent changes across the large majority of locations. Allele frequency shifts in juvenile (spawned from premortality adults) were consistent with those seen in adult survivors. Such parallel shifts suggest detectable signals of selection and highlight the potential for persistence of this change in subsequent generations, which may influence the resilience of this keystone species to future outbreaks.

摘要

遗传变异使种群能够或限制其应对变化条件的能力,包括预计随着人为气候变化的继续而增加频率和强度的极端干扰。然而,我们对于种群如何通过快速的遗传变化来应对极端事件,以及种群动态如何影响和受种群基因组变化的影响,知之甚少。我们利用广泛的流行疾病——海星消耗疾病,该疾病始于 2013 年年中,导致大量死亡,来探索关键海洋物种如何应对极端干扰。我们将实地调查与限制位点相关的 DNA 测序数据相结合,()描述死亡率和恢复的种群动态,以及()比较疾病爆发前成熟个体的等位基因频率与爆发后的成年个体和新幼体的等位基因频率,以确定是否可能发生选择。我们发现,在 2012 年至 2015 年期间,该研究区域的 81%的个体死亡,并且自 2013 年末以来,同时出现了 74 倍的招募增加。对爆发前后的成年个体的比较表明,在三个基因座上发生了显著的等位基因频率变化,这些变化在绝大多数地点都一致。幼体(由早期死亡的成年个体产生)的等位基因频率变化与成年幸存者所见的变化一致。这种平行变化表明存在可检测的选择信号,并强调了这种变化在后代中持续存在的潜力,这可能会影响这种关键物种对未来爆发的恢复能力。

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