• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于特征空间的多时空域疾病聚集探测方法:在巴基斯坦开伯尔-普赫图赫瓦省麻疹热点检测中的应用。

An Eigenspace approach for detecting multiple space-time disease clusters: Application to measles hotspots detection in Khyber-Pakhtunkhwa, Pakistan.

机构信息

Department of Fundamental & Applied Sciences, Universiti Teknologi PETRONAS, Bandar Seri Iskandar, Tronoh Perak, Malaysia.

Department of Biostatistics, University of Oslo, Oslo, Norway.

出版信息

PLoS One. 2018 Jun 19;13(6):e0199176. doi: 10.1371/journal.pone.0199176. eCollection 2018.

DOI:10.1371/journal.pone.0199176
PMID:29920540
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6007829/
Abstract

Identifying the abnormally high-risk regions in a spatiotemporal space that contains an unexpected disease count is helpful to conduct surveillance and implement control strategies. The EigenSpot algorithm has been recently proposed for detecting space-time disease clusters of arbitrary shapes with no restriction on the distribution and quality of the data, and has shown some promising advantages over the state-of-the-art methods. However, the main problem with the EigenSpot method is that it cannot be adapted to detect more than one spatiotemporal hotspot. This is an important limitation, since, in reality, we may have multiple hotspots, sometimes at the same level of importance. We propose an extension of the EigenSpot algorithm, called Multi-EigenSpot that is able to handle multiple hotspots by iteratively removing previously detected hotspots and re-running the algorithm until no more hotspots are found. In addition, a visualization tool (heatmap) has been linked to the proposed algorithm to visualize multiple clusters with different colors. We evaluated the proposed method using the monthly data on measles cases in Khyber-Pakhtunkhwa, Pakistan (Jan 2016- Dec 2016), and the efficiency was compared with the state-of-the-art methods: EigenSpot and Space-time scan statistic (SaTScan). The results showed the effectiveness of the proposed method for detecting multiple clusters in a spatiotemporal space.

摘要

识别时空空间中异常高风险区域,该区域包含异常疾病计数,有助于进行监测和实施控制策略。EigenSpot 算法最近被提出,用于检测任意形状的时空疾病集群,对数据的分布和质量没有限制,并且与最先进的方法相比显示出一些有希望的优势。然而,EigenSpot 方法的主要问题是它不能适应检测多个时空热点。这是一个重要的限制,因为在现实中,我们可能有多个热点,有时处于相同的重要性水平。我们提出了 EigenSpot 算法的扩展,称为 Multi-EigenSpot,它能够通过迭代删除先前检测到的热点并重新运行算法来处理多个热点,直到不再发现热点。此外,已经将可视化工具(热图)链接到所提出的算法中,以便用不同的颜色可视化多个集群。我们使用巴基斯坦开伯尔-普赫图赫瓦省(2016 年 1 月至 2016 年 12 月)每月的麻疹病例数据评估了所提出的方法,并将效率与最先进的方法进行了比较:EigenSpot 和时空扫描统计(SaTScan)。结果表明,该方法在时空空间中检测多个集群是有效的。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2492/6007829/cd073534e96d/pone.0199176.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2492/6007829/2262d30c343a/pone.0199176.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2492/6007829/755b8989ad83/pone.0199176.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2492/6007829/ddb55e7c5af2/pone.0199176.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2492/6007829/6b321c2838a6/pone.0199176.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2492/6007829/cd073534e96d/pone.0199176.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2492/6007829/2262d30c343a/pone.0199176.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2492/6007829/755b8989ad83/pone.0199176.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2492/6007829/ddb55e7c5af2/pone.0199176.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2492/6007829/6b321c2838a6/pone.0199176.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2492/6007829/cd073534e96d/pone.0199176.g005.jpg

相似文献

1
An Eigenspace approach for detecting multiple space-time disease clusters: Application to measles hotspots detection in Khyber-Pakhtunkhwa, Pakistan.基于特征空间的多时空域疾病聚集探测方法:在巴基斯坦开伯尔-普赫图赫瓦省麻疹热点检测中的应用。
PLoS One. 2018 Jun 19;13(6):e0199176. doi: 10.1371/journal.pone.0199176. eCollection 2018.
2
Detecting space-time disease clusters with arbitrary shapes and sizes using a co-clustering approach.使用共聚类方法检测具有任意形状和大小的时空疾病聚集。
Geospat Health. 2017 Nov 6;12(2):567. doi: 10.4081/gh.2017.567.
3
Space-Time Clustering Characteristics of Tuberculosis in Khyber Pakhtunkhwa Province, Pakistan, 2015-2019.时空聚类特征 2015-2019 年巴基斯坦开伯尔-普赫图赫瓦省的肺结核
Int J Environ Res Public Health. 2020 Feb 21;17(4):1413. doi: 10.3390/ijerph17041413.
4
Space-time cluster analysis of anemia in pregnant women in the province of Khyber Pakhtunkhwa, Pakistan (2014-2020).巴基斯坦开伯尔-普赫图赫瓦省孕妇贫血的时空聚类分析(2014-2020 年)。
Geospat Health. 2023 Oct 5;18(2). doi: 10.4081/gh.2023.1192.
5
A flexibly shaped space-time scan statistic for disease outbreak detection and monitoring.一种用于疾病爆发检测与监测的形状灵活的时空扫描统计量。
Int J Health Geogr. 2008 Apr 11;7:14. doi: 10.1186/1476-072X-7-14.
6
Spatial, temporal and spatio-temporal clusters of measles incidence at the county level in Guangxi, China during 2004-2014: flexibly shaped scan statistics.2004 - 2014年中国广西县级麻疹发病率的空间、时间和时空聚集性:灵活形状扫描统计
BMC Infect Dis. 2017 Apr 4;17(1):243. doi: 10.1186/s12879-017-2357-1.
7
Associations of the COVID-19 pandemic with the reported incidence of important endemic infectious disease agents and syndromes in Pakistan.新冠大流行与巴基斯坦报告的重要地方性传染病病原体和综合征发病率的关联。
BMC Infect Dis. 2022 Nov 26;22(1):887. doi: 10.1186/s12879-022-07869-3.
8
Folic acid supplementation and malaria susceptibility and severity among people taking antifolate antimalarial drugs in endemic areas.在流行地区,服用抗叶酸抗疟药物的人群中,叶酸补充剂与疟疾易感性和严重程度的关系。
Cochrane Database Syst Rev. 2022 Feb 1;2(2022):CD014217. doi: 10.1002/14651858.CD014217.
9
Temporal and spatial analysis of COVID-19 incidence hotspots in Pakistan: A spatio-statistical approach.巴基斯坦 COVID-19 发病率热点的时空分析:一种时空统计方法。
Spat Spatiotemporal Epidemiol. 2023 Nov;47:100603. doi: 10.1016/j.sste.2023.100603. Epub 2023 Jul 19.
10
Performance of a negative binomial-GLM in spatial scan statistic: a case study of low-birth weights in Pakistan.负二项式-GLM 在空间扫描统计中的表现:以巴基斯坦低出生体重为例的研究。
Geospat Health. 2024 Sep 3;19(2). doi: 10.4081/gh.2024.1313.

引用本文的文献

1
Space-Time Clustering Characteristics of Tuberculosis in Khyber Pakhtunkhwa Province, Pakistan, 2015-2019.时空聚类特征 2015-2019 年巴基斯坦开伯尔-普赫图赫瓦省的肺结核
Int J Environ Res Public Health. 2020 Feb 21;17(4):1413. doi: 10.3390/ijerph17041413.

本文引用的文献

1
Detecting space-time disease clusters with arbitrary shapes and sizes using a co-clustering approach.使用共聚类方法检测具有任意形状和大小的时空疾病聚集。
Geospat Health. 2017 Nov 6;12(2):567. doi: 10.4081/gh.2017.567.
2
Prevalence of measles in vaccinated and non-vaccinated children.接种疫苗和未接种疫苗儿童中的麻疹患病率。
EXCLI J. 2015 Apr 1;14:504-7. doi: 10.17179/excli2015-170. eCollection 2015.
3
Identifying pediatric cancer clusters in Florida using loglinear models and generalized lasso penalties.使用对数线性模型和广义套索罚则识别佛罗里达州的儿童癌症聚集区。
Stat Public Policy (Phila). 2014;1(1):86-96. doi: 10.1080/2330443X.2014.960120.
4
Progress toward measles elimination--Eastern Mediterranean Region, 2008-2012.向消除麻疹迈进--东地中海区域,2008-2012 年。
MMWR Morb Mortal Wkly Rep. 2014 Jun 13;63(23):511-5.
5
Maximum linkage space-time permutation scan statistics for disease outbreak detection.最大链接时空排列扫描统计量在疾病爆发检测中的应用。
Int J Health Geogr. 2014 Jun 10;13:20. doi: 10.1186/1476-072X-13-20.
6
Public health failings behind Pakistan's measles surge.巴基斯坦麻疹疫情激增背后的公共卫生缺陷。
Lancet. 2013 Jan 19;381(9862):189. doi: 10.1016/s0140-6736(13)60072-0.
7
Epidemiologic mapping of Florida childhood cancer clusters.佛罗里达州儿童癌症集群的流行病学绘图。
Pediatr Blood Cancer. 2010 Apr;54(4):511-8. doi: 10.1002/pbc.22403.
8
A flexibly shaped space-time scan statistic for disease outbreak detection and monitoring.一种用于疾病爆发检测与监测的形状灵活的时空扫描统计量。
Int J Health Geogr. 2008 Apr 11;7:14. doi: 10.1186/1476-072X-7-14.
9
Space-time clusters with flexible shapes.具有灵活形状的时空聚类。
MMWR Suppl. 2005 Aug 26;54:71-6.
10
A space-time permutation scan statistic for disease outbreak detection.用于疾病爆发检测的时空置换扫描统计量。
PLoS Med. 2005 Mar;2(3):e59. doi: 10.1371/journal.pmed.0020059. Epub 2005 Feb 15.