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深水亚北极沉积物(法罗-设得兰海峡)中的烃类降解细菌。

Hydrocarbon-degrading bacteria in deep-water subarctic sediments (Faroe-Shetland Channel).

机构信息

School of Biological Sciences, University of Aberdeen, Aberdeen, UK.

Surface Chemistry and Catalysis Group, Materials and Chemical Engineering, School of Engineering, University of Aberdeen, Aberdeen, UK.

出版信息

J Appl Microbiol. 2018 Oct;125(4):1040-1053. doi: 10.1111/jam.14030. Epub 2018 Jul 24.

Abstract

AIMS

The aim of this study was the baseline description of oil-degrading sediment bacteria along a depth transect in the Faroe-Shetland Channel (FSC) and the identification of biomarker taxa for the detection of oil contamination in FSC sediments.

METHODS AND RESULTS

Oil-degrading sediment bacteria from 135, 500 and 1000 m were enriched in cultures with crude oil as the sole carbon source (at 12, 5 and 0°C respectively). The enriched communities were studied using culture-dependent and culture-independent (clone libraries) techniques. Isolated bacterial strains were tested for hydrocarbon degradation capability. Bacterial isolates included well-known oil-degrading taxa and several that are reported in that capacity for the first time (Sulfitobacter, Ahrensia, Belliella, Chryseobacterium). The orders Oceanospirillales and Alteromonadales dominated clone libraries in all stations but significant differences occurred at genus level particularly between the shallow and the deep, cold-water stations. Alcanivorax constituted 64% of clones at FSC135 but was absent at deeper stations. Pseudoalteromonas and Oleispira dominated the bacterial community at 500 and 1000 m.

CONCLUSIONS

The genus Oleispira emerged as a major player in the early stages of crude oil degradation in deep-sea sediments of the FSC particularly at subzero temperatures. This finding is offering a direction for future research into biomonitoring tools for the detection of low levels of crude oil contamination in the deep FSC, and possibly high latitude cold waters in general.

SIGNIFICANCE AND IMPACT OF THE STUDY

Oil and gas exploration in the FSC occurs at depths >1000 m but baseline environmental data necessary for the assessment of ecosystem recovery to prespill conditions in the event of an oil spill are lacking. This study will contribute to our ability to assess the impact of oil release in the FSC and guide the direction of bioremediation strategies tailored to the area.

摘要

目的

本研究的目的是描述法罗-设得兰海峡(FSC)中沿深度剖面的石油降解沉积物细菌,并确定用于检测 FSC 沉积物中石油污染的生物标志物类群。

方法和结果

从 135、500 和 1000m 处的含油沉积物中,以原油作为唯一碳源,在分别为 12、5 和 0°C 的条件下进行富集培养,获得石油降解沉积物细菌。使用依赖培养和非依赖培养(克隆文库)技术研究富集群落。测试了分离出的细菌菌株的烃类降解能力。分离出的细菌菌株包括众所周知的石油降解类群,以及一些首次报道具有这种能力的类群(Sulfitobacter、Ahrensia、Belliella、Chryseobacterium)。在所有站位的海洋螺旋菌目和交替单胞菌目都占主导地位,但在浅水区和深水区,特别是在低温区,属水平上存在显著差异。在 FSC135 站位,Alcanivorax 构成了克隆文库的 64%,但在更深的站位中不存在。Pseudoalteromonas 和 Oleispira 则在 500 和 1000m 处主导着细菌群落。

结论

Oleispira 属在 FSC 深海沉积物中原油降解的早期阶段成为主要参与者,特别是在亚零温度下。这一发现为未来研究提供了方向,以便开发用于检测 FSC 深部和可能高纬度冷水地区低水平原油污染的生物监测工具。

研究的意义和影响

FSC 的石油和天然气勘探深度超过 1000m,但缺乏评估生态系统恢复到溢油前状态的基本环境数据。本研究将有助于我们评估 FSC 石油泄漏的影响,并为该地区量身定制生物修复策略提供指导方向。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f1f8/6849767/7159b920ef81/JAM-125-1040-g001.jpg

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