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四种苹果螺属(瓶螺科:Pomacea)物种的比较线粒体基因组分析。

Comparative mitogenome analysis on species of four apple snails (Ampullariidae: Pomacea).

机构信息

Zhejiang Provincial Key Laboratory of Biometrology and Inspection & Quarantine, College of Life Sciences, China Jiliang University, Hangzhou 310018, China.

Department of Entomology, China Agricultural University, Beijing 100193, China.

出版信息

Int J Biol Macromol. 2018 Oct 15;118(Pt A):525-533. doi: 10.1016/j.ijbiomac.2018.06.092. Epub 2018 Jun 20.

Abstract

The genus Pomacea contains most of the economically important Ampullariid apple snails. Five Pomacea species were reported introduced out of their native ranges, including three highly invasive species, i.e. P. maculata, P. canaliculata and an unidentified species, Pomacea sp. In this study, the mitogenome of P. maculata was determined, which carried typical gene set of metazoan mitogenomes and shared the same gene rearrangement of Ampullariidae mitogenomes. The control region of the P. maculata has a 13-bp inverted repeat unit. We compared the mitogenome of P. maculata with P. canaliculata, Pomacea sp. and the aquatic pet species, P. diffusa. The three highly invasive species showed high sequence similarity of PCGs and RNAs. atp8 and nad2 showed the lowest similarity and the highest Ka/Ks ratios, indicating that both genes have potential for studying species identification and populations genetics in apple snails. All PCGs have the Ka/Ks ratios <1, indicating the existence of purifying selection in Pomacea species. We reconstructed phylogenetic trees using 14 Caenogastropda species based on sequences of PCGs and rRNAs using Bayesian inference. Pomacea maculata grouped with other Ampullariids and was most closely related to Pomacea sp. The mitogenome of P. maculata provides useful genetic resource for exploring the genetics and evolution of P. maculata and other apple snails.

摘要

包含大多数经济上重要的瓶螺属苹果螺。有 5 种瓶螺属物种被报道已引入其原生范围之外,包括 3 种高度入侵物种,即 P. maculata、P. canaliculata 和一种未鉴定的物种,Pomacea sp. 在这项研究中,测定了 P. maculata 的线粒体基因组,其携带后生动物线粒体基因组的典型基因集,并具有相同的瓶螺科线粒体基因组的基因重排。P. maculata 的控制区具有 13 个碱基对的反向重复单元。我们比较了 P. maculata 与 P. canaliculata、Pomacea sp. 和水培宠物物种 P. diffusa 的线粒体基因组。这 3 种高度入侵的物种在 PCGs 和 RNA 上表现出高度的序列相似性。atp8 和 nad2 显示出最低的相似性和最高的 Ka/Ks 比值,表明这两个基因都有潜力用于研究苹果螺的物种鉴定和种群遗传学。所有 PCGs 的 Ka/Ks 比值<1,表明 Pomacea 物种中存在纯化选择。我们使用贝叶斯推断基于 PCGs 和 rRNAs 序列重建了 14 种腹足纲动物的系统发育树。P. maculata 与其他瓶螺属一起聚类,与 Pomacea sp. 最为密切相关。P. maculata 的线粒体基因组为探索 P. maculata 和其他苹果螺的遗传和进化提供了有用的遗传资源。

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