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淡水贻贝 Koreosolenaia、Parvasolenaia 和 Sinosolenaia(双壳纲:蚌科:球蚬亚科)的比较形态学和线粒体基因组学

Comparative morphology and mitogenomics of freshwater mussels Koreosolenaia, Parvasolenaia, and Sinosolenaia (Bivalvia: Unionidae: Gonideinae).

作者信息

Zhang Liping, Liu Xiaoyan, Hu Xinyan, Jia Junli, Liu Xiongjun, Wu Ruiwen

机构信息

School of Life Science, Shanxi Normal University, Taiyuan, 030031, China.

Shandong Fisheries Development and Resources Conservation Center, Jinan, 250000, China.

出版信息

BMC Genomics. 2024 Dec 24;25(1):1243. doi: 10.1186/s12864-024-11164-7.

Abstract

BACKGROUND

Amidst the escalating loss of global biodiversity, freshwater mussels (family Unionidae) have become one of the most imperiled animal groups. Acquiring more biological and phylogenetic information on understudied taxa constitutes a pivotal aspect of conservation biology. Consequently, a comprehensive examination was conducted on Koreosolenaia, Parvasolenaia, and Sinosolenaia from China encompassing morphology, anatomy, distribution, and molecular systematics to provide theoretical support for future species endangerment assessments and biodiversity conservation.

RESULTS

The shell characteristics of Koreosolenaia, Parvasolenaia, and Sinosolenaia were clearly distinct, and the soft-body morphology could also be easily distinguished from each other. The papillae of the incurrent aperture of Sinosolenaia iridinea, Sinosolenaia recognita, and Sinosolenaia oleivora, which were previously described as difficult, exhibited significant variations that could be utilized for species diagnosis. Furthermore, both incurrent and excurrent apertures of the Sinosolenaia species had small cysts on their dorsal surfaces which may be unique to this particular group. Comparative analysis of six mitochondrial genomes (Parvasolenaia rivularis, Koreosolenaia sitgyensis, Sinosolenaia iridinea, Sinosolenaia recognita, Sinosolenaia carinata, and Sinosolenaia oleivora) revealed a completely consistent gene arrangement pattern. Additionally, there was a high consistency in nucleotide base content and skewness, amino acid usage, and relative synonymous codon usage among the six complete mitochondrial genomes. Mitochondrial phylogenomics of these genomes with additional taxa within Gonideinae robustly supported the generic relationships as follows: (Inversidens + ((Microcondylaea + Sinosolenaia) + (Parvasolenaia + (Koreosolenaia + (Ptychorhynchus + (Postolata + Cosmopseudodon)))))).

CONCLUSIONS

The present study provided significant data on the shell morphology and soft-body anatomy of Koreosolenaia, Parvasolenaia, and Sinosolenaia, thereby clarifying the diagnostic characteristics for these challenging taxa. Additionally, we established a robust phylogenetic framework at both the generic and species levels based on mitochondrial genomics.

摘要

背景

在全球生物多样性不断丧失的背景下,淡水贻贝(蚌科)已成为最濒危的动物类群之一。获取更多关于研究不足的分类群的生物学和系统发育信息是保护生物学的一个关键方面。因此,对来自中国的朝鲜索螺、小索螺和中华索螺进行了全面研究,涵盖形态学、解剖学、分布和分子系统学,为未来的物种濒危评估和生物多样性保护提供理论支持。

结果

朝鲜索螺、小索螺和中华索螺的壳特征明显不同,软体形态也很容易相互区分。中华索螺、认可中华索螺和油中华索螺的入水孔乳头,以前被描述为难以区分,现在表现出显著差异,可用于物种诊断。此外,中华索螺物种的入水孔和出水孔在其背表面都有小囊肿,这可能是该特定类群独有的。对六个线粒体基因组(溪流小索螺、锡吉朝鲜索螺、中华索螺、认可中华索螺、龙骨中华索螺和油中华索螺)的比较分析揭示了完全一致的基因排列模式。此外,六个完整线粒体基因组在核苷酸碱基含量和偏度、氨基酸使用和相对同义密码子使用方面具有高度一致性。这些基因组与戈尼德亚科内其他分类群的线粒体系统发育基因组学有力地支持了以下属间关系:(反齿蚌属+((微凹蚌属+中华索螺属)+(小索螺属+(朝鲜索螺属+(褶唇蚌属+(后褶蚌属+宇宙伪齿蚌属)))))。

结论

本研究提供了关于朝鲜索螺、小索螺和中华索螺壳形态和软体解剖的重要数据,从而明确了这些具有挑战性的分类群的诊断特征。此外,我们基于线粒体基因组学在属和种水平上建立了一个强大的系统发育框架。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a2c3/11668111/8c448529a05c/12864_2024_11164_Fig1_HTML.jpg

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