通过宏基因组测序从2015年印度流感疫情中获得5条完整的甲型H1N1pdm09流感病毒基因组序列
Recovery of Five Complete Influenza A(H1N1)pdm09 Genome Sequences from the 2015 Influenza Outbreak in India by Metagenomic Sequencing.
作者信息
Dash Paban Kumar, Pattabiraman Chitra, Tandel Kundan, Sharma Shashi, Kumar Jyoti S, Siddappa Shilpa, Gowda Malali, Krishna Sudhir, Parida Manmohan
机构信息
Division of Virology, Defence Research and Development Establishment (DRDE), Gwalior, India.
National Centre for Biological Sciences, TIFR, Bangalore, India
出版信息
Genome Announc. 2018 Jun 28;6(26):e00511-18. doi: 10.1128/genomeA.00511-18.
Abstract
Five complete (H1N1)pdm09 viral sequences were recovered from hospitalized individuals during the 2015 influenza outbreak by metagenomic sequencing. Four of the genomes are from oropharyngeal swabs, and one is from an isolate. All five sequences belong to an emerging 6B clade. Studying them further is critical for outbreak preparedness.
摘要
在2015年流感爆发期间，通过宏基因组测序从住院患者中获得了5个完整的甲型H1N1流感病毒（H1N1)pdm09序列。其中4个基因组来自口咽拭子，1个来自分离株。所有5个序列都属于一个新出现的6B分支。进一步研究它们对于疫情防范至关重要。
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