• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

铜结合诱导淀粉样β肽的多态性:计算模型的结果。

Copper Binding Induces Polymorphism in Amyloid-β Peptide: Results of Computational Models.

机构信息

Institute of Physics , Polish Academy of Sciences , Al. Lotnikow 32/46 , 02-668 Warsaw , Poland.

Institute for Computational Science and Technology , 6 Quarter, Linh Trung Ward, Thu Duc District, Ho Chi Minh City 700000 , Vietnam.

出版信息

J Phys Chem B. 2018 Jul 26;122(29):7243-7252. doi: 10.1021/acs.jpcb.8b03983. Epub 2018 Jul 17.

DOI:10.1021/acs.jpcb.8b03983
PMID:29957993
Abstract

Amyloid-β (Aβ) peptides are intrinsically disordered peptides, and their aggregation is the hallmark of Alzheimer's disease development. The propensity of the Aβ peptide to intermolecular interactions, the latter favoring different types of oligomers and aggregated forms, has been the object of a huge number of studies. Several facts are now established: the presence of large amount of d-block (M) ions (Zn, Cu, and Fe) in the aggregated forms; the 1:1 M/Aβ ratio favors the formation of amorphous aggregates, with an aggregation rate lower than that in the absence of such ions. In particular, statistical models describing the interactions between copper and amyloid peptides are mandatory to explain the relationship between neurodegeneration, copper dyshomeostasis, and overproduction of reactive oxygen species, the latter event occurring with aging. In this work, we show, by replica-exchange molecular dynamics simulations, that a copper ion (Cu) bound as in the experimentally observed prevailing coordination enhances the probability of closed structures that hinder the formation of extended intermolecular hydrogen bonds that stabilize fibrillar ordered aggregated forms. On the other hand, this effect enhances the catalytic role of the complex during the lifetime of soluble forms.

摘要

淀粉样蛋白-β (Aβ) 肽是无规卷曲的肽,其聚集是阿尔茨海默病发展的标志。Aβ 肽具有分子间相互作用的倾向,后者有利于不同类型的低聚物和聚集形式,这一直是大量研究的对象。现在已经确定了几个事实:聚集形式中存在大量 d 块(M)离子(Zn、Cu 和 Fe);1:1 M/Aβ 比例有利于无定形聚集的形成,其聚集速率低于没有这些离子的情况。特别是,描述铜与淀粉样肽相互作用的统计模型对于解释神经退行性变、铜动态平衡失调以及活性氧(ROS)的过度产生之间的关系是强制性的,后一事件发生在衰老过程中。在这项工作中,我们通过 replica-exchange 分子动力学模拟表明,实验观察到的主要配位方式结合的铜离子 (Cu) 增强了封闭结构的形成概率,这些结构阻碍了稳定纤维状有序聚集形式的扩展分子间氢键的形成。另一方面,这种效应增强了该配合物在可溶性形式的寿命期间的催化作用。

相似文献

1
Copper Binding Induces Polymorphism in Amyloid-β Peptide: Results of Computational Models.铜结合诱导淀粉样β肽的多态性:计算模型的结果。
J Phys Chem B. 2018 Jul 26;122(29):7243-7252. doi: 10.1021/acs.jpcb.8b03983. Epub 2018 Jul 17.
2
Metal ions and intrinsically disordered proteins and peptides: from Cu/Zn amyloid-β to general principles.金属离子与无规卷曲蛋白质和肽:从 Cu/Zn 淀粉样-β到普遍原则。
Acc Chem Res. 2014 Aug 19;47(8):2252-9. doi: 10.1021/ar400293h. Epub 2014 May 29.
3
Cu and Zn interactions with Aβ peptides: consequence of coordination on aggregation and formation of neurotoxic soluble Aβ oligomers.铜和锌与 Aβ 肽的相互作用:配位对聚集和形成神经毒性可溶性 Aβ 寡聚物的影响。
Metallomics. 2019 Jan 23;11(1):64-84. doi: 10.1039/c8mt00203g.
4
Role of metal ions in the self-assembly of the Alzheimer's amyloid-β peptide.金属离子在阿尔茨海默病淀粉样β肽自组装中的作用。
Inorg Chem. 2013 Nov 4;52(21):12193-206. doi: 10.1021/ic4003059. Epub 2013 Apr 22.
5
Redox reactions of copper complexes formed with different beta-amyloid peptides and their neuropathological [correction of neuropathalogical] relevance.与不同β-淀粉样肽形成的铜配合物的氧化还原反应及其神经病理学相关性[将“neuropathalogical”更正为“neuropathological”]
Biochemistry. 2007 Aug 14;46(32):9270-82. doi: 10.1021/bi700508n. Epub 2007 Jul 18.
6
Transition Metal Ion Interactions with Disordered Amyloid-β Peptides in the Pathogenesis of Alzheimer's Disease: Insights from Computational Chemistry Studies.过渡金属离子与阿尔茨海默病发病机制中无序淀粉样β肽的相互作用:计算化学研究的新见解。
J Chem Inf Model. 2019 May 28;59(5):1782-1805. doi: 10.1021/acs.jcim.8b00983. Epub 2019 Apr 15.
7
Impact of Cu(II) Binding on Structures and Dynamics of Aβ Monomer and Dimer: Molecular Dynamics Study.铜(II)结合对淀粉样β蛋白单体和二聚体结构与动力学的影响:分子动力学研究
ACS Chem Neurosci. 2016 Oct 19;7(10):1348-1363. doi: 10.1021/acschemneuro.6b00109. Epub 2016 Aug 16.
8
Computational models explain how copper binding to amyloid-β peptide oligomers enhances oxidative pathways.计算模型解释了铜与淀粉样β肽寡聚物结合如何增强氧化途径。
Phys Chem Chem Phys. 2019 Apr 24;21(17):8774-8784. doi: 10.1039/c9cp00293f.
9
Identifying, by first-principles simulations, Cu[amyloid-β] species making Fenton-type reactions in Alzheimer's disease.通过第一性原理模拟鉴定阿尔茨海默病中发生 Fenton 型反应的 Cu[淀粉样蛋白-β]物种。
J Phys Chem B. 2013 Dec 27;117(51):16455-67. doi: 10.1021/jp410046w. Epub 2013 Dec 13.
10
Ab initio modelling of the structure and redox behaviour of copper(I) bound to a His-His model peptide: relevance to the beta-amyloid peptide of Alzheimer's disease.与组氨酸 - 组氨酸模型肽结合的铜(I)的结构和氧化还原行为的从头算建模:与阿尔茨海默病的β - 淀粉样肽的相关性
J Biol Inorg Chem. 2007 Feb;12(2):147-64. doi: 10.1007/s00775-006-0175-9. Epub 2006 Sep 30.

引用本文的文献

1
Computational Study of Amyloidβ Familial Mutations and Metal Interaction: Impact on Monomers and Aggregates Dynamical Behaviors.淀粉样β蛋白家族突变与金属相互作用的计算研究:对单体和聚集体动力学行为的影响
Inorg Chem. 2024 Mar 11;63(10):4725-4737. doi: 10.1021/acs.inorgchem.3c04555. Epub 2024 Feb 26.
2
Amyloid- Tetramers and Divalent Cations at the Membrane/Water Interface: Simple Models Support a Functional Role.淀粉样蛋白四聚体和二价阳离子在膜/水界面:简单模型支持其功能作用。
Int J Mol Sci. 2023 Aug 11;24(16):12698. doi: 10.3390/ijms241612698.
3
Computational assessment of the impact of Cu(II) and Al(III) on β-amyloid fibrils: Binding sites, structural stability, and possible physiological implications.
铜(II)和铝(III)对β-淀粉样蛋白原纤维影响的计算评估:结合位点、结构稳定性及可能的生理意义
Front Neurosci. 2023 Feb 6;17:1110311. doi: 10.3389/fnins.2023.1110311. eCollection 2023.
4
Calcium inhibits penetration of Alzheimer's Aβ - monomers into the membrane.钙抑制阿尔茨海默病 Aβ-单体穿透细胞膜。
Proteins. 2022 Dec;90(12):2124-2143. doi: 10.1002/prot.26403. Epub 2022 Aug 10.
5
Amyloid Oligomers: A Joint Experimental/Computational Perspective on Alzheimer's Disease, Parkinson's Disease, Type II Diabetes, and Amyotrophic Lateral Sclerosis.淀粉样寡聚体:阿尔茨海默病、帕金森病、2 型糖尿病和肌萎缩侧索硬化症的联合实验/计算研究视角。
Chem Rev. 2021 Feb 24;121(4):2545-2647. doi: 10.1021/acs.chemrev.0c01122. Epub 2021 Feb 5.
6
Polyphenols as Potential Metal Chelation Compounds Against Alzheimer's Disease.多酚类化合物作为防治阿尔茨海默病的潜在金属螯合剂。
J Alzheimers Dis. 2021;82(s1):S335-S357. doi: 10.3233/JAD-200185.
7
Protein Interaction with Charged Macromolecules: From Model Polymers to Unfolded Proteins and Post-Translational Modifications.蛋白质与带电大分子的相互作用:从模型聚合物到展开的蛋白质和翻译后修饰。
Int J Mol Sci. 2019 Mar 12;20(5):1252. doi: 10.3390/ijms20051252.