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完整脂多糖内毒素的固态核磁共振研究。

Solid State NMR Studies of Intact Lipopolysaccharide Endotoxin.

机构信息

Université Grenoble Alpes, CNRS, CEA, IBS , F-38000 Grenoble , France.

University of Naples Federico II , Department of Chemical Sciences , via cintia 4 , Napoli , Italy.

出版信息

ACS Chem Biol. 2018 Aug 17;13(8):2106-2113. doi: 10.1021/acschembio.8b00271. Epub 2018 Jul 2.

Abstract

Lipopolysaccharides (LPS) are complex glycolipids forming the outside layer of Gram-negative bacteria. Their hydrophobic and heterogeneous nature greatly hampers their structural study in an environment similar to the bacterial surface. We have studied LPS purified from E. coli and pathogenic P. aeruginosa with long O-antigen polysaccharides assembled in solution as vesicles or elongated micelles. Solid-state NMR with magic-angle spinning permitted the identification of NMR signals arising from regions with different flexibilities in the LPS, from the lipid components to the O-antigen polysaccharides. Atomic scale data on the LPS enabled the study of the interaction of gentamicin antibiotic bound to P. aeruginosa LPS, for which we could confirm that a specific oligosaccharide is involved in the antibiotic binding. The possibility to study LPS alone and bound to a ligand when it is assembled in membrane-like structures opens great prospects for the investigation of proteins and antibiotics that specifically target such an important molecule at the surface of Gram-negative bacteria.

摘要

脂多糖 (LPS) 是构成革兰氏阴性细菌外层的复杂糖脂。其疏水性和异质性极大地阻碍了它们在类似于细菌表面的环境中的结构研究。我们已经研究了从大肠杆菌和致病性铜绿假单胞菌中纯化的 LPS,这些 LPS 的长 O-抗原多糖在溶液中组装成囊泡或伸长的胶束。魔角旋转固态 NMR 允许识别来自 LPS 中具有不同柔韧性的区域的 NMR 信号,从脂质成分到 O-抗原多糖。关于 LPS 的原子尺度数据使我们能够研究与铜绿假单胞菌 LPS 结合的庆大霉素抗生素的相互作用,我们可以确认特定的寡糖参与了抗生素的结合。当 LPS 组装成类似膜的结构时,单独研究 LPS 及其与配体的结合为研究专门针对革兰氏阴性细菌表面这种重要分子的蛋白质和抗生素提供了广阔的前景。

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