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增强的核质转运是由于对弹性结合位点的竞争所致。

Enhanced Nucleocytoplasmic Transport due to Competition for Elastic Binding Sites.

机构信息

Department of Mathematics, University of Utah, Salt Lake City, Utah.

Department of Mathematics, University of Utah, Salt Lake City, Utah.

出版信息

Biophys J. 2018 Jul 3;115(1):108-116. doi: 10.1016/j.bpj.2018.05.034.

Abstract

Nuclear pore complexes (NPCs) control all traffic into and out of the cell nucleus. NPCs are molecular machines that simultaneously achieve high selectivity and high transport rates. The biophysical details of how cargoes rapidly traverse the pore remain unclear but are known to be mediated by interactions between cargo-binding chaperone proteins and natively unstructured nucleoporin proteins containing many phenylalanine-glycine repeats (FG nups) that line the pore's central channel. Here, we propose a specific and detailed physical mechanism for the high speed of nuclear import based on the elasticity of FG nups and on competition between individual chaperone proteins for FG nup binding. We develop a mathematical model to support our proposed mechanism. We suggest that the recycling of nuclear import factors back to the cytoplasm is important for driving high-speed import and predict the existence of an optimal cytoplasmic concentration of cargo for enhancing the rate of import over a purely diffusive rate.

摘要

核孔复合体(NPC)控制着所有进出细胞核的物质运输。NPC 是一种分子机器,能够同时实现高选择性和高运输速率。尽管尚不清楚货物如何快速穿过核孔,但已知这是通过货物结合伴侣蛋白与含有许多苯丙氨酸-甘氨酸重复(FG 核孔蛋白)的天然无规卷曲核孔蛋白之间的相互作用来介导的,这些 FG 核孔蛋白排列在核孔的中央通道内。在这里,我们基于 FG 核孔蛋白的弹性和单个伴侣蛋白与 FG 核孔蛋白结合的竞争,提出了一种用于核输入高速的具体而详细的物理机制。我们开发了一个数学模型来支持我们提出的机制。我们认为,核输入因子循环回到细胞质对于驱动高速输入很重要,并预测了货物在细胞质中的最佳浓度的存在,以提高输入速率,超过纯粹的扩散速率。

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