Ziesche Lisa, Rinkel Jan, Dickschat Jeroen S, Schulz Stefan
Institute of Organic Chemistry, Technische Universität Braunschweig, Hagenring 30, 38106 Braunschweig, Germany.
Kekulé-Institute of Organic Chemistry and Biochemistry, University of Bonn, Gerhard-Domagk-Str. 1, 53121 Bonn, Germany.
Beilstein J Org Chem. 2018 Jun 5;14:1309-1316. doi: 10.3762/bjoc.14.112. eCollection 2018.
-Acylhomoserine lactones (AHLs) are important bacterial messengers, mediating different bacterial traits by quorum sensing in a cell-density dependent manner. AHLs are also produced by many bacteria of the marine group, which constitutes a large group within the marine microbiome. Often, specific mixtures of AHLs differing in chain length and oxidation status are produced by bacteria, but how the biosynthetic enzymes, LuxI homologs, are selecting the correct acyl precursors is largely unknown. We have analyzed the AHL production in and three strains, revealing strain-specific mixtures. Although large differences were present between the species, the fatty acid profiles, the pool for the acyl precursors for AHL biosynthesis, were very similar. To test the acyl-chain selectivity, the three enzymes LuxI and LuxI from DFL-12 as well as PgaI from DSM 17395 were heterologously expressed in and the enzymes isolated for in vitro incubation experiments. The enzymes readily accepted shortened acyl coenzyme A analogs, -pantothenoylcysteamine thioesters of fatty acids (PCEs). Fifteen PCEs were synthesized, varying in chain length from C to C, the degree of unsaturation and also including unusual acid esters, e.g., 2,11-C18:2-PCE. The latter served as a precursor of the major AHL of DFL-12 LuxI, 2,11-C18:2-homoserine lactone (HSL). Incubation experiments revealed that PgaI accepts all substrates except C and C-PCE. Competition experiments demonstrated a preference of this enzyme for C and C PCEs. In contrast, the LuxI enzymes of are more selective. While 2,11-C18:2-PCE is preferentially accepted by LuxI, all other PCEs were not, except for the shorter, saturated C-C-PCEs. The AHL synthase LuxI accepted only C PCE and 3-hydroxydecanoyl-PCE. In summary, chain-length selectivity in AHLs can vary between different AHL enzymes. Both, a broad substrate acceptance and tuned specificity occur in the investigated enzymes.
-酰基高丝氨酸内酯(AHLs)是重要的细菌信号分子,通过群体感应以细胞密度依赖的方式介导不同的细菌特性。许多海洋菌群的细菌也会产生AHLs,这些细菌构成了海洋微生物群落中的一个大类群。通常,细菌会产生链长和氧化状态不同的特定AHL混合物,但生物合成酶(LuxI同源物)如何选择正确的酰基前体在很大程度上尚不清楚。我们分析了[具体名称1]和三种[具体名称2]菌株中的AHL产生情况,揭示了菌株特异性混合物。尽管不同物种之间存在很大差异,但脂肪酸谱(AHL生物合成的酰基前体库)非常相似。为了测试酰基链选择性,来自[具体名称3] DFL - 12的三种酶LuxI以及来自[具体名称4] DSM 17395的PgaI在[具体名称5]中进行了异源表达,并分离出这些酶用于体外孵育实验。这些酶很容易接受缩短的酰基辅酶A类似物,即脂肪酸的 - 泛酰巯基乙胺硫酯(PCEs)。合成了15种PCEs,链长从C到C不等,不饱和度也不同,还包括不寻常的酸酯,例如2,11 - C18:2 - PCE。后者是[具体名称3] DFL - 12 LuxI的主要AHL(2,11 - C18:2 - 高丝氨酸内酯,HSL)的前体。孵育实验表明,PgaI接受除C和C - PCE之外的所有底物。竞争实验证明该酶对C和C PCEs有偏好。相比之下,[具体名称3]的LuxI酶更具选择性。虽然2,11 - C18:2 - PCE被LuxI优先接受,但所有其他PCEs都不被接受,除了较短的饱和C - C - PCEs。AHL合酶LuxI只接受C PCE和3 - 羟基癸酰 - PCE。总之,AHLs中的链长选择性在不同的AHL酶之间可能会有所不同。在所研究的酶中既存在广泛的底物接受情况,也存在经过调整的特异性。