Suppr超能文献

在一个血管生成发芽的定性计算模型中,局部 uPAR-纤溶酶-TGFβ1 正反馈环解释了纤维蛋白原变体的体外效应。

A local uPAR-plasmin-TGFβ1 positive feedback loop in a qualitative computational model of angiogenic sprouting explains the in vitro effect of fibrinogen variants.

机构信息

Centrum Wiskunde & Informatica (CWI), Amsterdam, The Netherlands.

Mathematical Institute, Leiden University, Leiden, The Netherlands.

出版信息

PLoS Comput Biol. 2018 Jul 6;14(7):e1006239. doi: 10.1371/journal.pcbi.1006239. eCollection 2018 Jul.

Abstract

In experimental assays of angiogenesis in three-dimensional fibrin matrices, a temporary scaffold formed during wound healing, the type and composition of fibrin impacts the level of sprouting. More sprouts form on high molecular weight (HMW) than on low molecular weight (LMW) fibrin. It is unclear what mechanisms regulate the number and the positions of the vascular-like structures in cell cultures. To address this question, we propose a mechanistic simulation model of endothelial cell migration and fibrin proteolysis by the plasmin system. The model is a hybrid, cell-based and continuum, computational model based on the cellular Potts model and sets of partial-differential equations. Based on the model results, we propose that a positive feedback mechanism between uPAR, plasmin and transforming growth factor β1 (TGFβ1) selects cells in the monolayer for matrix invasion. Invading cells releases TGFβ1 from the extracellular matrix through plasmin-mediated fibrin degradation. The activated TGFβ1 further stimulates fibrin degradation and keeps proteolysis active as the sprout invades the fibrin matrix. The binding capacity for TGFβ1 of LMW is reduced relative to that of HMW. This leads to reduced activation of proteolysis and, consequently, reduced cell ingrowth in LMW fibrin compared to HMW fibrin. Thus our model predicts that endothelial cells in LMW fibrin matrices compared to HMW matrices show reduced sprouting due to a lower bio-availability of TGFβ1.

摘要

在三维纤维蛋白基质中的血管生成实验中,纤维蛋白的类型和组成会影响发芽的程度。在高分子量(HMW)纤维蛋白上形成的芽比在低分子量(LMW)纤维蛋白上多。目前尚不清楚是什么机制调节细胞培养物中血管样结构的数量和位置。为了解决这个问题,我们提出了一种内皮细胞迁移和纤维蛋白蛋白水解的机制模拟模型,由纤溶系统完成。该模型是一种基于细胞 Potts 模型和偏微分方程的混合、基于细胞的连续计算模型。基于模型结果,我们提出 uPAR、纤溶酶和转化生长因子 β1(TGFβ1)之间的正反馈机制选择单层中的细胞进行基质浸润。浸润细胞通过纤溶酶介导的纤维蛋白降解从细胞外基质中释放 TGFβ1。激活的 TGFβ1 进一步刺激纤维蛋白降解,并在芽侵入纤维蛋白基质时保持蛋白水解活性。LMW 与 HMW 相比,其与 TGFβ1 的结合能力降低。这导致 LMW 纤维蛋白中的蛋白水解活性降低,因此与 HMW 纤维蛋白相比,LMW 纤维蛋白中的细胞内渗减少。因此,我们的模型预测,与 HMW 基质相比,LMW 纤维蛋白基质中的内皮细胞由于 TGFβ1 的生物利用度降低,其发芽能力降低。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4a8a/6072121/402db68f495b/pcbi.1006239.g001.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验