Suppr超能文献

人诱导多能干细胞衍生心肌细胞复现钙处理异常模型的自动优化

Automatic Optimization of an Model of Human iPSC Derived Cardiomyocytes Recapitulating Calcium Handling Abnormalities.

作者信息

Paci Michelangelo, Pölönen Risto-Pekka, Cori Dario, Penttinen Kirsi, Aalto-Setälä Katriina, Severi Stefano, Hyttinen Jari

机构信息

Faculty of Biomedical Sciences and Engineering, BioMediTech Institute, Tampere University of Technology, Tampere, Finland.

Faculty of Medicine and Life Sciences, BioMediTech Institute, University of Tampere, Tampere, Finland.

出版信息

Front Physiol. 2018 Jun 26;9:709. doi: 10.3389/fphys.2018.00709. eCollection 2018.

Abstract

The growing importance of human induced pluripotent stem cell-derived cardiomyoyctes (hiPSC-CMs), as patient-specific and disease-specific models for studying cellular cardiac electrophysiology or for preliminary cardiotoxicity tests, generated better understanding of hiPSC-CM biophysical mechanisms and great amount of action potential and calcium transient data. In this paper, we propose a new hiPSC-CM model, with particular attention to Ca handling. We used (i) the hiPSC-CM Paci2013 model as starting point, (ii) a new dataset of Ca transient measurements to tune the parameters of the inward and outward Ca fluxes of sarcoplasmic reticulum, and (iii) an automatic parameter optimization to fit action potentials and Ca transients. The Paci2018 model simulates, together with the typical hiPSC-CM spontaneous action potentials, more refined Ca transients and delayed afterdepolarizations-like abnormalities, which the old Paci2013 was not able to predict due to its mathematical formulation. The Paci2018 model was validated against (i) the same current blocking experiments used to validate the Paci2013 model, and (ii) recently published data about effects of different extracellular ionic concentrations. In conclusion, we present a new and more versatile model, which will provide a platform for modeling the effects of drugs or mutations that affect Ca handling in hiPSC-CMs.

摘要

人类诱导多能干细胞衍生心肌细胞(hiPSC-CMs)作为用于研究细胞心脏电生理学或进行初步心脏毒性测试的患者特异性和疾病特异性模型,其重要性日益增加,这使得人们对hiPSC-CM的生物物理机制有了更好的理解,并产生了大量的动作电位和钙瞬变数据。在本文中,我们提出了一种新的hiPSC-CM模型,特别关注钙处理。我们使用(i)hiPSC-CM Paci2013模型作为起点,(ii)一个新的钙瞬变测量数据集来调整肌浆网内向和外向钙通量的参数,以及(iii)自动参数优化来拟合动作电位和钙瞬变。Paci2018模型除了模拟典型的hiPSC-CM自发动作电位外,还能模拟更精细的钙瞬变和延迟后去极化样异常,而旧的Paci2013模型由于其数学公式无法预测这些异常。Paci2018模型通过(i)用于验证Paci2013模型的相同电流阻断实验,以及(ii)最近发表的关于不同细胞外离子浓度影响的数据进行了验证。总之,我们提出了一个新的、更通用的模型,它将为模拟影响hiPSC-CMs中钙处理的药物或突变的作用提供一个平台。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/dbf4/6028769/f20e5c4c34b2/fphys-09-00709-g0001.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验