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通过时间分辨红外光谱对溶液中以及与DNA结合时的[Ru(phen)(dppz)]光开关化合物的亮态和暗态激发态进行直接观测。

Direct observation by time-resolved infrared spectroscopy of the bright and the dark excited states of the [Ru(phen)(dppz)] light-switch compound in solution and when bound to DNA.

作者信息

Poynton Fergus E, Hall James P, Keane Páraic M, Schwarz Christine, Sazanovich Igor V, Towrie Michael, Gunnlaugsson Thorfinnur, Cardin Christine J, Cardin David J, Quinn Susan J, Long Conor, Kelly John M

机构信息

School of Chemistry , Trinity College Dublin , The University of Dublin , Dublin 2 , Ireland . Email:

Trinity Biomedical Sciences Institute (TBSI) , Trinity College Dublin , The University of Dublin , Dublin 2 , Ireland.

出版信息

Chem Sci. 2016 May 1;7(5):3075-3084. doi: 10.1039/c5sc04514b. Epub 2016 Jan 27.

DOI:10.1039/c5sc04514b
PMID:29997799
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6005197/
Abstract

The [Ru(phen)(dppz)] complex () is non-emissive in water but is highly luminescent in organic solvents or when bound to DNA, making it a useful probe for DNA binding. To date, a complete mechanistic explanation for this "light-switch" effect is still lacking. With this in mind we have undertaken an ultrafast time resolved infrared (TRIR) study of and directly observe marker bands between 1280-1450 cm, which characterise both the emissive "bright" and the non-emissive "dark" excited states of the complex, in CDCN and DO respectively. These characteristic spectral features are present in the [Ru(dppz)] solvent light-switch complex but absent in [Ru(phen)], which is luminescent in both solvents. DFT calculations show that the vibrational modes responsible for these characteristic bands are predominantly localised on the dppz ligand. Moreover, they reveal that certain vibrational modes of the "dark" excited state couple with vibrational modes of two coordinating water molecules, and through these to the bulk solvent, thus providing a new insight into the mechanism of the light-switch effect. We also demonstrate that the marker bands for the "bright" state are observed for both Λ- and Δ-enantiomers of when bound to DNA and that photo-excitation of the complex induces perturbation of the guanine and cytosine carbonyl bands. This perturbation is shown to be stronger for the Λ-enantiomer, demonstrating the different binding site properties of the two enantiomers and the ability of this technique to determine the identity and nature of the binding site of such intercalators.

摘要

[Ru(phen)(dppz)]配合物()在水中不发光,但在有机溶剂中或与DNA结合时具有高发光性,使其成为一种有用的DNA结合探针。迄今为止,对于这种“光开关”效应仍缺乏完整的机理解释。考虑到这一点,我们对进行了超快时间分辨红外(TRIR)研究,并分别在CDCN和DO中直接观察到1280 - 1450 cm之间的标记带,这些标记带表征了该配合物的发射性“亮”激发态和非发射性“暗”激发态。这些特征光谱特征存在于[Ru(dppz)]溶剂光开关配合物中,但在[Ru(phen)]中不存在,[Ru(phen)]在两种溶剂中均发光。密度泛函理论(DFT)计算表明,负责这些特征带的振动模式主要定域在dppz配体上。此外,计算结果表明,“暗”激发态的某些振动模式与两个配位水分子的振动模式耦合,并通过这些水分子与本体溶剂耦合,从而为光开关效应的机制提供了新的见解。我们还证明,当与DNA结合时,对于的Λ-和Δ-对映体均观察到“亮”态的标记带,并且配合物的光激发会引起鸟嘌呤和胞嘧啶羰基带的扰动。结果表明,这种扰动对于Λ-对映体更强,这证明了两种对映体不同的结合位点性质以及该技术确定此类嵌入剂结合位点的身份和性质的能力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f315/6005197/790cc4f03387/c5sc04514b-f9.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f315/6005197/fee248cb79c3/c5sc04514b-f8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f315/6005197/790cc4f03387/c5sc04514b-f9.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f315/6005197/ded4d86442a4/c5sc04514b-f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f315/6005197/4532a2c93719/c5sc04514b-f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f315/6005197/5b61b6c3563c/c5sc04514b-f7.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f315/6005197/fee248cb79c3/c5sc04514b-f8.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f315/6005197/790cc4f03387/c5sc04514b-f9.jpg

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