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猪外周血单核细胞对胸膜肺炎放线杆菌反应的转录组分析揭示了与免疫炎症反应相关的差异表达基因的动态变化。

Transcriptomic analysis of porcine PBMCs in response to Actinobacillus pleuropneumoniae reveals the dynamic changes of differentially expressed genes related to immuno-inflammatory responses.

作者信息

Jiang Hexiang, Zhu Rining, Liu Hongtao, Bao Chuntong, Liu Jianfang, Eltahir Abdalla, Langford Paul R, Sun Diangang, Liu Zhonghua, Sun Changjiang, Gu Jingmin, Han Wenyu, Feng Xin, Lei Liancheng

机构信息

College of Veterinary Medicine, Jilin University, Xi'an Road 5333, Changchun, China.

Section of Paediatrics, Imperial College London, London, UK.

出版信息

Antonie Van Leeuwenhoek. 2018 Dec;111(12):2371-2384. doi: 10.1007/s10482-018-1126-5. Epub 2018 Jul 14.

DOI:10.1007/s10482-018-1126-5
PMID:30008077
Abstract

Actinobacillus pleuropneumoniae is the cause of porcine pleuropneumonia, for which the mortality rate is high. Host peripheral blood is a body site for the immune clearance of pathogens mediated by release of inflammatory factors. However, "out of control" inflammatory factor release can contribute to host death. To further understand the changes in the transcription level of immune-related effectors, samples of peripheral blood mononuclear cells (PBMCs) collected from piglets at different stages of infection (0, 24 and 120 h) were sequenced on an Illumina HiSeq™ 4000 platform. We found 3818 differentially expressed genes (DEGs) in the 24 h-infection group compared to the 0 h-infection group (Pb24-Vs-Pb0). DEGs mainly involved in the Gene ontology and KEGG pathways that included nucleic acid metabolism regulation, cell growth, cell differentiation, and organ morphological maintenance were not significantly enriched (P > 0.05). However, DEGs associated with protein kinase activity, receptor activation, metabolism, local adhesion and immune inflammatory responses were significantly enriched in Pb120-Vs-Pb24 (P < 0.05), as were those related to the T cell receptor signalling pathway, with most being down-regulated compared to the preceding stage (Pb24-Vs-Pb0). In PBMCs there were some changes in glucose metabolism, local adhesion and the immune inflammatory response (Pb120-Vs-Pb0). In addition, up-regulated DEGs, such as IL8, IL1β, and CCL2, and were significantly enriched in immune-inflammatory related pathways compared to the uninfected stage, although they began to decline after 24 h.

摘要

胸膜肺炎放线杆菌是猪胸膜肺炎的病原体,该病死亡率很高。宿主外周血是病原体通过炎症因子释放介导免疫清除的身体部位。然而,炎症因子的“失控”释放会导致宿主死亡。为了进一步了解免疫相关效应分子转录水平的变化,在Illumina HiSeq™ 4000平台上对感染不同阶段(0、24和120小时)仔猪采集的外周血单个核细胞(PBMC)样本进行了测序。我们发现,与0小时感染组相比,24小时感染组(Pb24-Vs-Pb0)有3818个差异表达基因(DEG)。主要参与基因本体论和KEGG通路(包括核酸代谢调控、细胞生长、细胞分化和器官形态维持)的DEG未显著富集(P>0.05)。然而,与蛋白激酶活性、受体激活、代谢、局部黏附及免疫炎症反应相关的DEG在Pb120-Vs-Pb24中显著富集(P<0.05),与T细胞受体信号通路相关的DEG也是如此,与前一阶段(Pb24-Vs-Pb0)相比,大多数呈下调状态。在PBMC中,葡萄糖代谢、局部黏附及免疫炎症反应(Pb120-Vs-Pb0)有一些变化。此外,与未感染阶段相比,IL8、IL1β和CCL2等上调的DEG在免疫炎症相关通路中显著富集,尽管它们在24小时后开始下降。

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