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大鼠基因组中度重复元件RU的体外转录

In vitro transcription of RU, a middle repetitive element of the rat genome.

作者信息

Page G, Salvato M, Goodman H M

出版信息

Nucleic Acids Res. 1986 Jan 24;14(2):899-914. doi: 10.1093/nar/14.2.899.

DOI:10.1093/nar/14.2.899
PMID:3003699
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC339472/
Abstract

Repetitive DNA sequences have been found within as well as adjacent to the rat growth hormone (rGH) gene (1,2). In vitro transcription of the rGH gene yields transcripts predominantly from a tandemly duplicated repeat (RU) in the second intron of the gene. The relative alpha-amanitin sensitivity of this transcription indicates that it is carried out by RNA polymerase III. Transcription initiates within a 5' flanking 15 base-pair repeat, and terminates within a stretch of A residues at the end of each repeat, a termination site that is notably unlike most of those used by polymerase III. Approximately 75% of the transcripts stop at the end of the first repeat; the remainder "read-through" to a homologous termination region at the end of the second repeat.

摘要

在大鼠生长激素(rGH)基因内部及其相邻区域发现了重复DNA序列(1,2)。rGH基因的体外转录主要产生来自该基因第二个内含子中串联重复序列(RU)的转录本。这种转录对α-鹅膏蕈碱的相对敏感性表明它是由RNA聚合酶III进行的。转录起始于5'侧翼的15个碱基对重复序列内,并在每个重复序列末端的一段A残基处终止,该终止位点与聚合酶III使用的大多数终止位点明显不同。大约75%的转录本在第一个重复序列末端停止;其余的“通读”到第二个重复序列末端的同源终止区域。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/73a5/339472/97492620d1b8/nar00271-0288-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/73a5/339472/4ab015296a1a/nar00271-0281-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/73a5/339472/0d9573f5ffa4/nar00271-0282-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/73a5/339472/67f9cba4354e/nar00271-0283-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/73a5/339472/a037642c8750/nar00271-0287-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/73a5/339472/97492620d1b8/nar00271-0288-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/73a5/339472/4ab015296a1a/nar00271-0281-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/73a5/339472/0d9573f5ffa4/nar00271-0282-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/73a5/339472/67f9cba4354e/nar00271-0283-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/73a5/339472/a037642c8750/nar00271-0287-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/73a5/339472/97492620d1b8/nar00271-0288-a.jpg

相似文献

1
In vitro transcription of RU, a middle repetitive element of the rat genome.大鼠基因组中度重复元件RU的体外转录
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2
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本文引用的文献

1
The Chinese hamster Alu-equivalent sequence: a conserved highly repetitious, interspersed deoxyribonucleic acid sequence in mammals has a structure suggestive of a transposable element.中国仓鼠Alu等效序列:一种在哺乳动物中保守的高度重复、散布的脱氧核糖核酸序列,其结构提示为一种可转座元件。
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A control region in the center of the 5S RNA gene directs specific initiation of transcription: II. The 3' border of the region.5S RNA基因中心的一个控制区域指导转录的特异性起始:II. 该区域的3'边界。
Cell. 1980 Jan;19(1):27-35. doi: 10.1016/0092-8674(80)90385-2.
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Transcriptional analysis of interspersed repetitive polymerase III transcription units in human DNA.
人类DNA中散布的重复聚合酶III转录单位的转录分析。
Nucleic Acids Res. 1981 Mar 11;9(5):1171-89. doi: 10.1093/nar/9.5.1171.
4
Repetitive sequences in eukaryotic DNA and their expression.真核生物DNA中的重复序列及其表达。
Annu Rev Biochem. 1982;51:813-44. doi: 10.1146/annurev.bi.51.070182.004121.
5
Primary structure and evolution of rat growth hormone gene.大鼠生长激素基因的一级结构与进化
Proc Natl Acad Sci U S A. 1981 Aug;78(8):4867-71. doi: 10.1073/pnas.78.8.4867.
6
DNA-dependent transcription of adenovirus genes in a soluble whole-cell extract.腺病毒基因在可溶性全细胞提取物中的DNA依赖性转录。
Proc Natl Acad Sci U S A. 1980 Jul;77(7):3855-9. doi: 10.1073/pnas.77.7.3855.
7
Low molecular weight RNAs transcribed in vitro by RNA polymerase III from Alu-type dispersed repeats in Chinese hamster DNA are also found in vivo.由RNA聚合酶III体外转录中国仓鼠DNA中Alu型分散重复序列产生的低分子量RNA在体内也能找到。
Proc Natl Acad Sci U S A. 1981 Oct;78(10):6130-4. doi: 10.1073/pnas.78.10.6130.
8
Two control regions for eukaryotic tRNA gene transcription.真核生物tRNA基因转录的两个控制区。
Proc Natl Acad Sci U S A. 1980 Jun;77(6):3365-8. doi: 10.1073/pnas.77.6.3365.
9
DNA sequence of the rat growth hormone gene: location of the 5' terminus of the growth hormone mRNA and identification of an internal transposon-like element.大鼠生长激素基因的DNA序列:生长激素mRNA 5'末端的定位及一种内部类转座子元件的鉴定
Nucleic Acids Res. 1981 May 11;9(9):2087-104. doi: 10.1093/nar/9.9.2087.
10
Nucleotide sequences in Xenopus 5S DNA required for transcription termination.非洲爪蟾5S DNA转录终止所需的核苷酸序列。
Cell. 1981 Apr;24(1):261-70. doi: 10.1016/0092-8674(81)90522-5.