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本文引用的文献

1
Simulation-Based Approach to Determining Electron Transfer Rates Using Square-Wave Voltammetry.基于模拟的方法,使用方波伏安法测定电子转移速率。
Langmuir. 2017 May 9;33(18):4407-4413. doi: 10.1021/acs.langmuir.7b00359. Epub 2017 Apr 26.
2
Aβ42 assembles into specific β-barrel pore-forming oligomers in membrane-mimicking environments.在模拟膜的环境中,Aβ42组装成特定的β-桶状成孔寡聚体。
Proc Natl Acad Sci U S A. 2016 Sep 27;113(39):10866-71. doi: 10.1073/pnas.1605104113. Epub 2016 Sep 12.
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Trp-Cage Folding on Organic Surfaces.色氨酸笼在有机表面上的折叠
J Phys Chem B. 2015 Aug 20;119(33):10417-25. doi: 10.1021/acs.jpcb.5b04213. Epub 2015 Aug 5.
4
Interactions between misfolded protein oligomers and membranes: A central topic in neurodegenerative diseases?错误折叠的蛋白质寡聚体与膜之间的相互作用:神经退行性疾病的核心主题?
Biochim Biophys Acta. 2015 Sep;1848(9):1897-907. doi: 10.1016/j.bbamem.2015.01.018. Epub 2015 Feb 7.
5
Selective ribosome profiling as a tool for studying the interaction of chaperones and targeting factors with nascent polypeptide chains and ribosomes.选择性核糖体谱分析作为一种研究伴侣蛋白和靶向因子与新生多肽链和核糖体相互作用的工具。
Nat Protoc. 2013 Nov;8(11):2212-39. doi: 10.1038/nprot.2013.133. Epub 2013 Oct 17.
6
The Escherichia coli peripheral inner membrane proteome.大肠杆菌外周内膜蛋白质组。
Mol Cell Proteomics. 2013 Mar;12(3):599-610. doi: 10.1074/mcp.M112.024711. Epub 2012 Dec 10.
7
FTIR and XPS studies of protein adsorption onto functionalized bioactive glass.傅里叶变换红外光谱(FTIR)和X射线光电子能谱(XPS)对蛋白质吸附在功能化生物活性玻璃上的研究
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8
Structure of a peptide adsorbed on graphene and graphite.肽在石墨烯和石墨上的吸附结构。
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9
Entropic and electrostatic effects on the folding free energy of a surface-attached biomolecule: an experimental and theoretical study.熵和静电效应对表面附着生物分子折叠自由能的影响:实验和理论研究。
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In vivo demonstration that alpha-synuclein oligomers are toxic.体内实验证明α-突触核蛋白寡聚体具有毒性。
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蛋白质-表面相互作用热力学的定量测量。

Quantitative measurements of protein-surface interaction thermodynamics.

机构信息

Department of Chemistry and Biochemistry, University of California, Santa Barbara, CA 93106.

Center for Bioengineering, University of California, Santa Barbara, CA 93106.

出版信息

Proc Natl Acad Sci U S A. 2018 Aug 14;115(33):8352-8357. doi: 10.1073/pnas.1800287115. Epub 2018 Jul 30.

DOI:10.1073/pnas.1800287115
PMID:30061388
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6099891/
Abstract

Whereas proteins generally remain stable upon interaction with biological surfaces, they frequently unfold on and adhere to artificial surfaces. Understanding the physicochemical origins of this discrepancy would facilitate development of protein-based sensors and other technologies that require surfaces that do not compromise protein structure and function. To date, however, only a small number of such artificial surfaces have been reported, and the physics of why these surfaces support functional biomolecules while others do not has not been established. Thus motivated, we have developed an electrochemical approach to determining the folding free energy of proteins site-specifically attached to chemically well-defined, macroscopic surfaces. Comparison with the folding free energies seen in bulk solution then provides a quantitative measure of the extent to which surface interactions alter protein stability. As proof-of-principle, we have characterized the FynSH3 domain site-specifically attached to a hydroxyl-coated surface. Upon guanidinium chloride denaturation, the protein unfolds in a reversible, two-state manner with a free energy within 2 kJ/mol of the value seen in bulk solution. Assuming that excluded volume effects stabilize surface-attached proteins, this observation suggests there are countervening destabilizing interactions with the surface that, under these conditions, are similar in magnitude. Our technique constitutes an unprecedented experimental tool with which to answer long-standing questions regarding the molecular-scale origins of protein-surface interactions and to facilitate rational optimization of surface biocompatibility.

摘要

虽然蛋白质在与生物表面相互作用时通常保持稳定,但它们经常在人工表面上展开并附着在人工表面上。了解这种差异的物理化学起源将有助于开发基于蛋白质的传感器和其他需要表面不破坏蛋白质结构和功能的技术。然而,迄今为止,仅报道了少数此类人工表面,并且尚未确定为什么这些表面支持功能生物分子而其他表面不支持的物理原因。因此,我们开发了一种电化学方法,可特异性地将蛋白质固定在化学性质明确的宏观表面上,从而确定蛋白质的折叠自由能。然后,将其与在本体溶液中看到的折叠自由能进行比较,可定量衡量表面相互作用对蛋白质稳定性的影响程度。作为原理验证,我们已经对特异性附着在羟基涂层表面上的 FynSH3 结构域进行了表征。在盐酸胍变性后,蛋白质以可逆的两态方式展开,其自由能与在本体溶液中看到的值相差 2 kJ/mol 以内。假设排除体积效应稳定表面附着的蛋白质,这一观察结果表明,与表面存在相互抵消的去稳定化相互作用,在这些条件下,其大小相似。我们的技术构成了一种前所未有的实验工具,可用于回答有关蛋白质-表面相互作用的分子尺度起源的长期存在的问题,并有助于合理优化表面生物相容性。