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三叶青黄酮类化合物处理肺癌A549细胞后微小RNA表达谱变化分析

Analysis of change in microRNA expression profiles of lung cancer A549 cells treated with Radix tetrastigma hemsleyani flavonoids.

作者信息

Liu Peigang, Yang Xu, Zhang Hongjian, Pu Jinbao, Wei Kemin

机构信息

Center for Medicinal Resources Research, Zhejiang Academy of Traditional Chinese Medicine, Hangzhou 310007, People's Republic of China,

出版信息

Onco Targets Ther. 2018 Jul 24;11:4283-4300. doi: 10.2147/OTT.S164276. eCollection 2018.

Abstract

BACKGROUND

The aim of this study was to determine the inhibition effects of Radix tetrastigma hemsleyani (RTH) flavonoids on human lung adenocarcinoma A549 cells and the underlying molecular mechanism. RTH is an important Chinese traditional herb that has been widely used in cancer therapy. As an important type of active substance, RTH flavones (RTHF) have been shown to have good antiproliferative effects on various cancer cells. MicroRNAs (miRNAs) are small, noncoding RNA molecules that play important roles in cancer progression and prevention. However, the miRNA profile of RTHF-treated A549 cells has not yet been studied.

MATERIALS AND METHODS

The miRNA expression profile changes of A549 cell treated with RTHF were determined using the miRNA-seq analysis. Furthermore, Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses of differentially expressed miRNAs' (DE-miRNAs) target genes were carried out.

RESULTS

In this study, we identified 162 miRNAs that displayed expression changes >1.2-fold in RTHF-treated A549 cells. GO analysis results showed that target genes of DE-miRNAs were significantly enriched in protein binding, binding, cell, cell part, intracellular, cellular process, single-organism process, and single-organism cellular process. Pathway analysis illustrated that target genes of DE-miRNAs are mainly involved in endocytosis, axon guidance, lysosome, melanogenesis, and acute myeloid leukemia pathway.

CONCLUSION

These results may assist in the better understanding of the anticancer effects of RTHF in A549 cells.

摘要

背景

本研究旨在确定乌蔹莓黄酮(RTH)对人肺腺癌A549细胞的抑制作用及其潜在分子机制。乌蔹莓是一种重要的传统中药,已广泛应用于癌症治疗。作为一种重要的活性物质类型,乌蔹莓黄酮(RTHF)已被证明对多种癌细胞具有良好的抗增殖作用。微小RNA(miRNA)是小的非编码RNA分子,在癌症进展和预防中起重要作用。然而,RTHF处理的A549细胞的miRNA谱尚未得到研究。

材料与方法

采用miRNA测序分析确定RTHF处理的A549细胞的miRNA表达谱变化。此外,对差异表达miRNA(DE-miRNA)的靶基因进行基因本体(GO)和京都基因与基因组百科全书(KEGG)富集分析。

结果

在本研究中,我们鉴定出162个在RTHF处理的A549细胞中表达变化>1.2倍的miRNA。GO分析结果表明,DE-miRNA的靶基因在蛋白质结合、结合、细胞、细胞部分胞内、细胞过程、单生物体过程和单生物体细胞过程中显著富集。通路分析表明,DE-miRNA的靶基因主要参与内吞作用、轴突导向、溶酶体、黑色素生成和急性髓系白血病通路。

结论

这些结果可能有助于更好地理解RTHF对A549细胞的抗癌作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/851f/6065472/6ce945abb1a7/ott-11-4283Fig1.jpg

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