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本文引用的文献

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Convolutional neural networks for seizure prediction using intracranial and scalp electroencephalogram.卷积神经网络在颅内和头皮脑电图中的癫痫预测。
Neural Netw. 2018 Sep;105:104-111. doi: 10.1016/j.neunet.2018.04.018. Epub 2018 May 7.
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Postictal suppression and seizure durations: A patient-specific, long-term iEEG analysis.发作后抑制和发作持续时间:患者特异性的长程 iEEG 分析。
Epilepsia. 2018 May;59(5):1027-1036. doi: 10.1111/epi.14065. Epub 2018 Apr 6.
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Multi-day rhythms modulate seizure risk in epilepsy.多日节律调节癫痫的发作风险。
Nat Commun. 2018 Jan 8;9(1):88. doi: 10.1038/s41467-017-02577-y.
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Seizure Forecasting from Idea to Reality. Outcomes of the My Seizure Gauge Epilepsy Innovation Institute Workshop.从创意到现实:癫痫创新研究所的 My Seizure Gauge 癫痫预测研讨会成果。
eNeuro. 2017 Dec 27;4(6). doi: 10.1523/ENEURO.0349-17.2017. eCollection 2017 Nov-Dec.
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Epileptic Seizure Prediction Using Big Data and Deep Learning: Toward a Mobile System.基于大数据和深度学习的癫痫发作预测:迈向移动系统。
EBioMedicine. 2018 Jan;27:103-111. doi: 10.1016/j.ebiom.2017.11.032. Epub 2017 Dec 12.
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The circadian profile of epilepsy improves seizure forecasting.癫痫的昼夜节律特征可改善癫痫发作预测。
Brain. 2017 Aug 1;140(8):2169-2182. doi: 10.1093/brain/awx173.
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Neuron. 2016 Nov 2;92(3):617-621. doi: 10.1016/j.neuron.2016.10.037.
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Detecting Neonatal Seizures With Computer Algorithms.利用计算机算法检测新生儿癫痫发作
J Clin Neurophysiol. 2016 Oct;33(5):394-402. doi: 10.1097/WNP.0000000000000295.
9
Crowdsourcing reproducible seizure forecasting in human and canine epilepsy.众包人类和犬类癫痫中可重复的癫痫发作预测
Brain. 2016 Jun;139(Pt 6):1713-22. doi: 10.1093/brain/aww045. Epub 2016 Mar 31.
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Seizure Prediction: Science Fiction or Soon to Become Reality?癫痫发作预测:科幻小说还是即将成为现实?
Curr Neurol Neurosci Rep. 2015 Nov;15(11):73. doi: 10.1007/s11910-015-0596-3.

癫痫生态系统组织:通过长期的人类颅内 EEG 进行可重复的癫痫发作预测的众包

Epilepsyecosystem.org: crowd-sourcing reproducible seizure prediction with long-term human intracranial EEG.

机构信息

Department of Medicine - St. Vincent's, The University of Melbourne, Parkville VIC, Australia.

NeuroEngineering Lab, Department of Biomedical Engineering, The University of Melbourne, Parkville VIC, Australia.

出版信息

Brain. 2018 Sep 1;141(9):2619-2630. doi: 10.1093/brain/awy210.

DOI:10.1093/brain/awy210
PMID:30101347
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6136083/
Abstract

Accurate seizure prediction will transform epilepsy management by offering warnings to patients or triggering interventions. However, state-of-the-art algorithm design relies on accessing adequate long-term data. Crowd-sourcing ecosystems leverage quality data to enable cost-effective, rapid development of predictive algorithms. A crowd-sourcing ecosystem for seizure prediction is presented involving an international competition, a follow-up held-out data evaluation, and an online platform, Epilepsyecosystem.org, for yielding further improvements in prediction performance. Crowd-sourced algorithms were obtained via the 'Melbourne-University AES-MathWorks-NIH Seizure Prediction Challenge' conducted at kaggle.com. Long-term continuous intracranial electroencephalography (iEEG) data (442 days of recordings and 211 lead seizures per patient) from prediction-resistant patients who had the lowest seizure prediction performances from the NeuroVista Seizure Advisory System clinical trial were analysed. Contestants (646 individuals in 478 teams) from around the world developed algorithms to distinguish between 10-min inter-seizure versus pre-seizure data clips. Over 10 000 algorithms were submitted. The top algorithms as determined by using the contest data were evaluated on a much larger held-out dataset. The data and top algorithms are available online for further investigation and development. The top performing contest entry scored 0.81 area under the classification curve. The performance reduced by only 6.7% on held-out data. Many other teams also showed high prediction reproducibility. Pseudo-prospective evaluation demonstrated that many algorithms, when used alone or weighted by circadian information, performed better than the benchmarks, including an average increase in sensitivity of 1.9 times the original clinical trial sensitivity for matched time in warning. These results indicate that clinically-relevant seizure prediction is possible in a wider range of patients than previously thought possible. Moreover, different algorithms performed best for different patients, supporting the use of patient-specific algorithms and long-term monitoring. The crowd-sourcing ecosystem for seizure prediction will enable further worldwide community study of the data to yield greater improvements in prediction performance by way of competition, collaboration and synergism.10.1093/brain/awy210_video1awy210media15817489051001.

摘要

准确的癫痫发作预测将通过向患者发出警告或触发干预措施来改变癫痫的管理方式。然而,最先进的算法设计依赖于获取足够的长期数据。众包生态系统利用高质量的数据来实现具有成本效益的、快速开发预测算法。本文介绍了一个用于癫痫发作预测的众包生态系统,其中包括一个国际竞赛、后续的保持数据集评估以及一个在线平台 Epilepsyecosystem.org,以进一步提高预测性能。通过在 kaggle.com 上进行的“墨尔本大学 AES-MathWorks-NIH 癫痫发作预测挑战赛”,获得了众包算法。对来自 NeuroVista 癫痫预警系统临床试验中预测性能最低的预测抵抗患者的长期连续颅内脑电图(iEEG)数据(每位患者 442 天的记录和 211 个导联癫痫发作)进行了分析。来自世界各地的参赛者(478 个团队中的 646 人)开发了算法来区分 10 分钟的发作间与发作前数据片段。共提交了 10000 多个算法。使用竞赛数据确定的顶级算法在更大的保持数据集上进行了评估。数据和顶级算法可在线获取,以供进一步研究和开发。得分最高的竞赛条目获得了 0.81 的分类曲线下面积。在保持数据集上的性能仅降低了 6.7%。许多其他团队也表现出了很高的预测可重复性。伪前瞻性评估表明,许多算法(单独使用或根据昼夜节律信息加权)的性能优于基准,包括匹配预警时间时敏感性平均提高了原始临床试验敏感性的 1.9 倍。这些结果表明,在比以前认为的更广泛的患者范围内,临床相关的癫痫发作预测是可能的。此外,不同的算法对不同的患者表现最佳,支持使用患者特异性算法和长期监测。用于癫痫发作预测的众包生态系统将使全世界范围内的社区能够进一步研究这些数据,通过竞争、协作和协同作用,提高预测性能。