Department of Applied Biological Chemistry, Faculty of Agriculture, Meijo University, Nagoya, Japan.
Faculty of Agriculture, Kyushu University, Fukuoka, Japan.
Appl Environ Microbiol. 2018 Oct 30;84(22). doi: 10.1128/AEM.01091-18. Print 2018 Nov 15.
The activity of a self-sufficient cytochrome P450 enzyme, CYP505D6, from the lignin-degrading basidiomycete was characterized. Recombinant CYP505D6 was produced in and purified. In the presence of NADPH, CYP505D6 used a series of saturated fatty alcohols with C carbon chain lengths as the substrates. Hydroxylation occurred at the ω-1 to ω-6 positions of such substrates with C carbon chain lengths, except for 1-dodecanol, which was hydroxylated at the ω-1 to ω-7 positions. Fatty acids were also substrates of CYP505D6. Based on the sequence alignment, the corresponding amino acid of Tyr51, which is located at the entrance to the active-site pocket in CYP102A1, was Val51 in CYP505D6. To understand the diverse hydroxylation mechanism, wild-type CYP505D6 and its V51Y variant and wild-type CYP102A1 and its Y51V variant were generated, and the products of their reaction with dodecanoic acid were analyzed. Compared with wild-type CYP505D6, its V51Y variant generated few products hydroxylated at the ω-4 to ω-6 positions. The products generated by wild-type CYP102A1 were hydroxylated at the ω-1 to ω-4 positions, whereas its Y51V variant generated ω-1 to ω-7 hydroxydodecanoic acids. These observations indicated that Val51 plays an important role in determining the regiospecificity of fatty acid hydroxylation, at least that at the ω-4 to ω-6 positions. Aromatic compounds, such as naphthalene and 1-naphthol, were also hydroxylated by CYP505D6. These findings highlight a unique broad substrate spectrum of CYP505D6, rendering it an attractive candidate enzyme for the biotechnological industry. is a white-rot fungus whose metabolism of lignin, aromatic pollutants, and lipids has been most extensively studied. This fungus harbors 154 cytochrome P450-encoding genes in the genome. As evidenced in this study, CYP505D6, a fused protein of P450 and its reductase, hydroxylates fatty alcohols (C) and fatty acids (C) at the ω-1 to ω-7 or ω-1 to ω-6 positions, respectively. Naphthalene and 1-naphthol were also hydroxylated, indicating that the substrate specificity of CYP505D6 is broader than those of the known fused proteins CYP102A1 and CYP505A1. The substrate versatility of CYP505D6 makes this enzyme an attractive candidate for biotechnological applications.
从木质素降解担子菌中鉴定了一种自给自足的细胞色素 P450 酶 CYP505D6 的活性。在存在 NADPH 的情况下,CYP505D6 以一系列具有 C 碳链长度的饱和脂肪醇作为底物。除了 1-十二醇外,C 碳链长度的此类底物在 ω-1 到 ω-6 位发生羟化,而 1-十二醇在 ω-1 到 ω-7 位发生羟化。脂肪酸也是 CYP505D6 的底物。基于序列比对,位于 CYP102A1 活性部位口袋入口处的 Tyr51 对应的氨基酸在 CYP505D6 中为 Val51。为了理解这种多样化的羟化机制,生成了野生型 CYP505D6 及其 V51Y 变体和野生型 CYP102A1 及其 Y51V 变体,并分析了它们与十二烷酸反应的产物。与野生型 CYP505D6 相比,其 V51Y 变体生成的在 ω-4 到 ω-6 位羟化的产物较少。野生型 CYP102A1 生成的产物在 ω-1 到 ω-4 位羟化,而其 Y51V 变体生成 ω-1 到 ω-7 羟代十二烷酸。这些观察结果表明,Val51 在确定脂肪酸羟化的区域特异性方面起着重要作用,至少在 ω-4 到 ω-6 位。CYP505D6 还羟化芳香族化合物,如萘和 1-萘酚。这些发现突出了 CYP505D6 独特的广泛底物谱,使其成为生物技术产业有吸引力的候选酶。是一种白腐真菌,其木质素、芳香族污染物和脂质的代谢已得到最广泛的研究。该真菌在基因组中含有 154 个细胞色素 P450 编码基因。正如本研究所示,CYP505D6 是 P450 与其还原酶的融合蛋白,分别在 ω-1 到 ω-7 或 ω-1 到 ω-6 位羟基化脂肪醇(C)和脂肪酸(C)。萘和 1-萘酚也被羟化,表明 CYP505D6 的底物特异性比已知的融合蛋白 CYP102A1 和 CYP505A1 更广泛。CYP505D6 的底物多功能性使该酶成为生物技术应用的有吸引力的候选酶。