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一个三螺旋家族转录因子与混合链葡聚糖积累中的关键基因有关。

A Trihelix Family Transcription Factor Is Associated with Key Genes in Mixed-Linkage Glucan Accumulation.

机构信息

Department of Plant Biology, Michigan State University, East Lansing, Michigan 48824.

Great Lakes Bioenergy Research Center, Michigan State University, East Lansing, Michigan 48824.

出版信息

Plant Physiol. 2018 Nov;178(3):1207-1221. doi: 10.1104/pp.18.00978. Epub 2018 Sep 17.

Abstract

Mixed-linkage glucan (MLG) is a polysaccharide that is highly abundant in grass endosperm cell walls and present at lower amounts in other tissues. () and genes synthesize MLG, but it is unknown if other genes participate in the production and restructuring of MLG. Using transcriptional profiling data, we identified a trihelix family transcription factor () that is highly coexpressed with the gene (), which suggests that BdTHX1 is involved in the regulation of MLG biosynthesis. To determine the genes regulated by this transcription factor, we conducted chromatin immunoprecipitation sequencing (ChIP-seq) experiments using immature seeds and an anti-BdTHX1 polyclonal antibody. The ChIP-seq experiment identified the second intron of as one of the most enriched sequences. The binding of BdTHX1 to the intron sequence was confirmed using electrophoretic mobility shift assays (EMSA). ChIP-seq also showed that a gene encoding a grass-specific glycoside hydrolase family 16 endotransglucosylase/hydrolase () is bound by BdTHX1, and the binding was confirmed by EMSA. Radiochemical transglucanase assays showed that BdXTH8 exhibits predominantly MLG:xyloglucan endotransglucosylase activity, a hetero-transglycosylation reaction, and can thus produce MLG-xyloglucan covalent bonds; it also has a lower xyloglucan:xyloglucan endotransglucosylase activity. shoots regenerated from transformed calli overexpressing showed an abnormal arrangement of vascular tissue and seedling-lethal phenotypes. These results indicate that the transcription factor BdTHX1 likely plays an important role in MLG biosynthesis and restructuring by regulating the expression of and .

摘要

混合连接型葡聚糖(MLG)是一种多糖,在草类胚乳细胞壁中含量丰富,在其他组织中含量较低。()和()基因合成 MLG,但尚不清楚其他基因是否参与 MLG 的产生和重排。利用()转录谱数据,我们鉴定出一个()三螺旋家族转录因子()与()基因高度共表达,提示 BdTHX1 参与 MLG 生物合成的调控。为了确定该转录因子调控的基因,我们使用未成熟()种子和抗 BdTHX1 多克隆抗体进行染色质免疫沉淀测序(ChIP-seq)实验。ChIP-seq 实验鉴定出()基因的第二个内含子是最富集的序列之一。通过电泳迁移率变动分析(EMSA)证实了 BdTHX1 与()内含子序列的结合。ChIP-seq 还表明,编码草类特异性糖苷水解酶家族 16 内切葡聚糖酶/水解酶()的基因由 BdTHX1 结合,EMSA 证实了这种结合。放射性化学转葡聚糖酶测定表明,BdXTH8 主要表现出 MLG:木葡聚糖内切转葡糖苷酶/水解酶活性,即杂转糖基化反应,因此可以产生 MLG-木葡聚糖共价键;它也具有较低的木葡聚糖:木葡聚糖内切转葡糖苷酶活性。过表达()的转化愈伤组织再生的()植株表现出血管组织排列异常和幼苗致死表型。这些结果表明,转录因子 BdTHX1 可能通过调节()和()的表达,在 MLG 生物合成和重排中发挥重要作用。

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