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沙门氏菌噬菌体 S16 尾丝黏附素具有罕见的富含甘氨酸的结构域,用于宿主识别。

Salmonella Phage S16 Tail Fiber Adhesin Features a Rare Polyglycine Rich Domain for Host Recognition.

机构信息

Institute of Food, Nutrition and Health, ETH Zurich, Zurich, Switzerland.

Institute of Food, Nutrition and Health, ETH Zurich, Zurich, Switzerland.

出版信息

Structure. 2018 Dec 4;26(12):1573-1582.e4. doi: 10.1016/j.str.2018.07.017. Epub 2018 Sep 20.

Abstract

The ability of phages to infect specific bacteria has led to their exploitation as bio-tools for bacterial remediation and detection. Many phages recognize bacterial hosts via adhesin tips of their long tail fibers (LTFs). Adhesin sequence plasticity modulates receptor specificity, and thus primarily defines a phage's host range. Here we present the crystal structure of an adhesin (gp38) attached to a trimeric β-helical tip (gp37) from the Salmonella phage S16 LTF. Gp38 contains rare polyglycine type II helices folded into a packed lattice, herein designated "PG sandwich." Sequence variability within the domain is limited to surface-exposed helices and distal loops that form putative receptor-binding sites. In silico analyses revealed a prevalence of the adhesin architecture among T-even phages, excluding the archetypal T4 phage. Overall, S16 LTF provides a valuable model for understanding binding mechanisms of phage adhesins, and for engineering of phage adhesins with expandable or modulated host ranges.

摘要

噬菌体能够感染特定的细菌,这使得它们成为细菌修复和检测的生物工具。许多噬菌体通过其长尾纤维(LTF)的粘附尖端识别细菌宿主。粘附序列的可塑性调节受体特异性,因此主要决定了噬菌体的宿主范围。在这里,我们展示了来自沙门氏菌噬菌体 S16 LTF 的粘附蛋白(gp38)连接到三聚体β-螺旋尖端(gp37)的晶体结构。gp38 包含罕见的折叠成堆积晶格的多甘氨酸 II 型螺旋,本文将其命名为“PG 三明治”。该结构域内的序列变异性仅限于表面暴露的螺旋和形成潜在受体结合位点的远端环。计算机分析表明,除了典型的 T4 噬菌体之外,这种粘附蛋白结构在 T 偶数噬菌体中很常见。总的来说,S16 LTF 为理解噬菌体粘附蛋白的结合机制以及设计具有可扩展或可调节宿主范围的噬菌体粘附蛋白提供了有价值的模型。

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