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编码基底膜α1(IV)和α2(IV)链的人类胶原蛋白基因定位于13号染色体长臂远端。

Human collagen genes encoding basement membrane alpha 1 (IV) and alpha 2 (IV) chains map to the distal long arm of chromosome 13.

作者信息

Griffin C A, Emanuel B S, Hansen J R, Cavenee W K, Myers J C

出版信息

Proc Natl Acad Sci U S A. 1987 Jan;84(2):512-6. doi: 10.1073/pnas.84.2.512.

DOI:10.1073/pnas.84.2.512
PMID:3025878
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC304239/
Abstract

At least 20 genes encode the structurally related collagen chains that comprise greater than 10 homo- or heterotrimeric types. Six members of this multigene family have been assigned to five chromosomes in the human genome. The two type I genes, alpha 1 and alpha 2, are located on chromosomes 17 and 7, respectively, and the alpha 1 (II) gene is located on chromosome 12. Our recent mapping of the alpha 1 (III) and alpha 2 (V) genes to the q24.3----q31 region of chromosome 2 provided the only evidence that the collagen genes are not entirely dispersed. To further determine their organization, we and others localized the alpha 1 (IV) gene to chromosome 13 and in our experiments sublocalized the gene to band q34 by in situ hybridization. Here we show the presence of the alpha 2 type IV locus also on the distal long arm of chromosome 13 by hybridizing a human alpha 2 (IV) cDNA clone to rodent-human hybrids and to metaphase chromosomes. To our knowledge, these studies represent the only demonstration of linkage between genes encoding both polypeptide chains of the same collagen type.

摘要

至少有20个基因编码结构相关的胶原链,这些胶原链构成了10多种同三聚体或异三聚体类型。这个多基因家族的6个成员已被定位到人类基因组的5条染色体上。两个I型基因,α1和α2,分别位于17号和7号染色体上,而α1(II)基因位于12号染色体上。我们最近将α1(III)和α2(V)基因定位到2号染色体的q24.3----q31区域,这是唯一表明胶原基因并非完全分散的证据。为了进一步确定它们的组织方式,我们和其他人将α1(IV)基因定位到13号染色体上,并且在我们的实验中通过原位杂交将该基因亚定位到q34带。在此,我们通过将人α2(IV)cDNA克隆与啮齿动物-人类杂种细胞和中期染色体杂交,证明α2 IV型基因座也存在于13号染色体的远端长臂上。据我们所知,这些研究是编码同一类型胶原的两条多肽链的基因之间存在连锁关系的唯一证明。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d70e/304239/d9e1f375e83a/pnas00267-0202-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d70e/304239/d9e1f375e83a/pnas00267-0202-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d70e/304239/d9e1f375e83a/pnas00267-0202-a.jpg

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1
Human collagen genes encoding basement membrane alpha 1 (IV) and alpha 2 (IV) chains map to the distal long arm of chromosome 13.编码基底膜α1(IV)和α2(IV)链的人类胶原蛋白基因定位于13号染色体长臂远端。
Proc Natl Acad Sci U S A. 1987 Jan;84(2):512-6. doi: 10.1073/pnas.84.2.512.
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本文引用的文献

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Type-IV collagens. Isolation and characterization of two structurally distinct collagen chains from bovine kidney cortices.IV型胶原蛋白。从牛肾皮质中分离并鉴定出两条结构不同的胶原链。
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Identification of a novel sequence element in the common promoter region of human collagen type IV genes, involved in the regulation of divergent transcription.在人类IV型胶原蛋白基因的共同启动子区域中鉴定出一种新型序列元件,其参与了差异转录的调控。
Biochem J. 1993 Jun 15;292 ( Pt 3)(Pt 3):687-95. doi: 10.1042/bj2920687.
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Physical localisation of the chromosomal marker D13S31 places the Wilson disease locus at the junction of bands q14.3 and q21.1 of chromosome 13.染色体标记D13S31的物理定位将威尔逊病基因座定位于13号染色体q14.3和q21.1带的交界处。
Hum Genet. 1993 Jun;91(5):504-6. doi: 10.1007/BF00217780.
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Type IV collagen alpha 5 chain. Normal distribution and abnormalities in X-linked Alport syndrome revealed by monoclonal antibody.IV型胶原α5链。单克隆抗体揭示X连锁遗传性肾炎中的正常分布及异常情况。
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Canine X chromosome-linked hereditary nephritis: a genetic model for human X-linked hereditary nephritis resulting from a single base mutation in the gene encoding the alpha 5 chain of collagen type IV.犬X染色体连锁遗传性肾炎:一种因编码IV型胶原α5链的基因发生单碱基突变导致的人类X连锁遗传性肾炎的遗传模型。
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人基底膜中胶原蛋白明显异质性的结构基础:IV型前胶原包含两条不同的链。
Proc Natl Acad Sci U S A. 1980 Feb;77(2):745-9. doi: 10.1073/pnas.77.2.745.
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Regional localization of the human alpha 2(I) collagen gene on chromosome 7 by molecular hybridization.通过分子杂交将人类α2(I)胶原蛋白基因定位到7号染色体上。
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Basement membrane (type IV) collagen is a heteropolymer.基底膜(IV型)胶原蛋白是一种异聚物。
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Type IV collagen from chicken muscular tissues. Isolation and characterization of the pepsin-resistant fragments.来自鸡肌肉组织的IV型胶原蛋白。胃蛋白酶抗性片段的分离与表征
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Self-assembly of basement membrane collagen.基底膜胶原蛋白的自组装
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Confirmation that the type I collagen gene on chromosome 17 is COL1A1 (alpha 1(I), using a human genomic probe.使用人类基因组探针证实17号染色体上的I型胶原蛋白基因是COL1A1(α1(I))。
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Eur J Biochem. 1984 Mar 1;139(2):401-10. doi: 10.1111/j.1432-1033.1984.tb08019.x.
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Nature. 1983;305(5937):779-84. doi: 10.1038/305779a0.