Institute of Medical Sciences, Tzu Chi University, Hualien, Taiwan.
Department of Medicine, Mackay Medical College, New Taipei, Taiwan.
Sci Rep. 2018 Oct 2;8(1):14602. doi: 10.1038/s41598-018-32981-3.
The increase in the prevalence of antibiotic-resistant bacteria has become a major public health concern. Antimicrobial peptides (AMPs) are emerging as promising candidates addressing this issue. In this study, we designed several AMPs by increasing α-helical contents and positive charges and optimizing hydrophobicity and amphipathicity in the Sushi 1 peptide from horseshoe crabs. A neural network-based bioinformatic prediction tool was used for the first stage evaluations of peptide properties. Among the peptides designed, Sushi-replacement peptide (SRP)-2, an arginine-rich and highly α-helical peptide, showed broad-spectrum bactericidal activity against both Gram-positive and Gram-negative bacteria, including methicillin-resistant Staphylococcus aureus and multidrug-resistant Acinetobacter baumannii; nevertheless, it showed little hemolytic and cytotoxic activity against mammalian cells. Atomic force microscopy results indicated that SRP-2 should interact directly with cell membrane components, resulting in bacterial cell death. SRP-2 also neutralized LPS-induced macrophage activation. Moreover, in an intraperitoneal multidrug-resistant A. baumannii infection mouse model, SRP-2 successfully reduced the bacterial number in ascitic fluid and tumor necrosis factor-α production. Our study findings demonstrate that bioinformatic calculations can be powerful tools to help design potent AMPs and that arginine is superior to lysine for providing positive charges for AMPs to exhibit better bactericidal activity and selectivity against bacterial cells.
抗生素耐药菌的流行率不断增加,已成为主要的公共卫生关注点。抗菌肽 (AMPs) 作为一种有前途的解决方案,正在被广泛研究。在本研究中,我们通过增加α-螺旋含量和正电荷,并优化来自鲎的 Sushi 1 肽的疏水性和两亲性,设计了几种 AMPs。我们使用基于神经网络的生物信息学预测工具对肽性质进行了初步评估。在所设计的肽中,富含精氨酸且高度α-螺旋的 Sushi 替换肽 (SRP)-2 对革兰氏阳性和革兰氏阴性菌均具有广谱杀菌活性,包括耐甲氧西林金黄色葡萄球菌和多药耐药鲍曼不动杆菌;然而,它对哺乳动物细胞的溶血和细胞毒性活性较小。原子力显微镜结果表明,SRP-2 应直接与细胞膜成分相互作用,导致细菌细胞死亡。SRP-2 还能中和 LPS 诱导的巨噬细胞激活。此外,在腹腔内多药耐药鲍曼不动杆菌感染小鼠模型中,SRP-2 成功降低了腹水和肿瘤坏死因子-α产生中的细菌数量。我们的研究结果表明,生物信息学计算可以成为设计有效 AMPs 的有力工具,并且精氨酸比赖氨酸更适合为 AMPs 提供正电荷,以使其具有更好的杀菌活性和对细菌细胞的选择性。