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蛋白质组学和代谢组学方法在慢性肾脏病生物标志物研究中的应用。

Proteomic and metabolomic approaches in the search for biomarkers in chronic kidney disease.

机构信息

Epidemiology and Public Health Research Group, Centre for Public Health, Queen's University of Belfast, Regional Genetics Centre, Level A, Tower Block, Belfast City Hospital, Lisburn Road, Belfast BT9 7AB, United Kingdom; Regional Nephrology Unit, Belfast City Hospital, Belfast, United Kingdom.

出版信息

J Proteomics. 2019 Feb 20;193:93-122. doi: 10.1016/j.jprot.2018.09.020. Epub 2018 Oct 5.

DOI:10.1016/j.jprot.2018.09.020
PMID:30292816
Abstract

Chronic kidney disease (CKD) is an aging-related disorder that represents a major global public health burden. Current biochemical biomarkers, such as serum creatinine and urinary albumin, have important limitations when used to identify the earliest indication of CKD or in tracking the progression to more advanced CKD. These issues underline the importance of finding and testing new molecular biomarkers that are capable of successfully meeting this clinical need. The measurement of changes in nature and/or levels of proteins and metabolites in biological samples from patients provide insights into pathophysiological processes. Proteomic and metabolomic techniques provide opportunities to record dynamic chemical signatures in patients over time. This review article presents an overview of the recent developments in the fields of metabolomics and proteomics in relation to CKD. Among the many different proteomic biomarkers proposed, there is particular interest in the CKD273 classifier, a urinary proteome biomarker reported to predict CKD progression and with implementation potential. Other individual non-invasive peptidomic biomarkers that are potentially relevant for CKD detection include type 1 collagen, uromodulin and mucin-1. Despite the limited sample sizes and variability of the metabolomics studies, some metabolites such as trimethylamine N-oxide, kynurenine and citrulline stand out as potential biomarkers in CKD.

摘要

慢性肾脏病(CKD)是一种与衰老相关的疾病,是全球主要的公共卫生负担之一。目前的生化标志物,如血清肌酐和尿白蛋白,在用于识别 CKD 的早期迹象或跟踪向更严重 CKD 进展时存在重要局限性。这些问题突显了寻找和测试新的分子生物标志物的重要性,这些标志物有能力成功满足这一临床需求。测量患者生物样本中蛋白质和代谢物的性质和/或水平的变化,可以深入了解病理生理过程。蛋白质组学和代谢组学技术为记录患者随时间变化的动态化学特征提供了机会。本文综述了代谢组学和蛋白质组学在 CKD 方面的最新进展。在提出的许多不同的蛋白质组学生物标志物中,CKD273 分类器特别引人注目,这是一种尿液蛋白质组生物标志物,据报道可预测 CKD 进展,并具有潜在的实施能力。其他潜在相关的用于 CKD 检测的个体非侵入性肽类生物标志物包括 1 型胶原蛋白、尿调蛋白和粘蛋白-1。尽管代谢组学研究的样本量有限且存在可变性,但一些代谢物,如三甲胺 N-氧化物、犬尿氨酸和瓜氨酸,作为 CKD 的潜在生物标志物脱颖而出。

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