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梨草螺菌新种,从梨树树皮中分离得到。

Herbaspirillum piri sp. nov., isolated from bark of a pear tree.

作者信息

Xu Guantang, Chang Jupu, Xue Han, Guo Minwei, Piao Chun-Gen, Li Yong

机构信息

1​The Key Laboratory of State Forestry Administration on Forest Protection, Forest Ecology Environment and Protection, Chinese Academy of Forestry, Beijing 100091, PR China.

2​Puyang Academy of Forestry, Puyang 457000, PR China.

出版信息

Int J Syst Evol Microbiol. 2018 Nov;68(11):3652-3656. doi: 10.1099/ijsem.0.003050. Epub 2018 Oct 10.

Abstract

A Gram-stain-negative, aerobic, motile bacterial strain, shQ-4, was isolated from a pear tree in Henan Province, China. The strain grew at 10-41 °C, at pH 4.0-8.0 and in the presence of 1-3 % (w/v) NaCl. It shared highest 16S rRNA gene sequence similarity (96.66 %) with Herbaspirillum chlorophenolicum CPW301. The phylogenetic tree based on 16S rRNA gene sequences showed that strain shQ-4 formed a distinct branch next to reference species in the genus Herbaspirillum. The profile of major polar lipids of strain shQ-4 contained phosphatidylethanolamine (PE), diphosphatidylglycerol (DPG), phosphatidylglycerol (PG) and an unidentified aminophospholipid (APL). The major respiratory quinone was Q-8. The major fatty acids of this strain were C16 : 0, summed feature 3 (C16 : 1ω6c/C16 : 1ω7c), C17 : 0 cyclo and C18 : 0. Strain shQ-4 is considered to represent a novel species of the genus Herbaspirillum, with the proposed name Herbaspirillum piri sp. nov. The type strain is shQ-4 (=CFCC 14641=KCTC 52804).

摘要

从中国河南省的一棵梨树上分离出一株革兰氏阴性、需氧、运动性细菌菌株shQ-4。该菌株在10-41°C、pH 4.0-8.0以及1-3%(w/v)NaCl存在的条件下生长。它与嗜氯酚草螺菌CPW301的16S rRNA基因序列相似度最高(96.66%)。基于16S rRNA基因序列构建的系统发育树表明,菌株shQ-4在草螺菌属中形成了一个与参考物种相邻的独特分支。菌株shQ-4的主要极性脂质谱包含磷脂酰乙醇胺(PE)、二磷脂酰甘油(DPG)、磷脂酰甘油(PG)和一种未鉴定的氨基磷脂(APL)。主要呼吸醌为Q-8。该菌株的主要脂肪酸为C16:0、总和特征3(C16:1ω6c/C16:1ω7c)、C17:0环丙烷和C18:0。菌株shQ-4被认为代表草螺菌属的一个新物种,提议命名为嗜梨草螺菌(Herbaspirillum piri)新种。模式菌株为shQ-4(=CFCC 14641=KCTC 52804)。

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