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由RNA聚合酶III转录的热带爪蟾U6小核RNA基因包含由依赖RNA聚合酶II的U小核RNA基因使用的上游启动子元件。

Xenopus tropicalis U6 snRNA genes transcribed by Pol III contain the upstream promoter elements used by Pol II dependent U snRNA genes.

作者信息

Krol A, Carbon P, Ebel J P, Appel B

出版信息

Nucleic Acids Res. 1987 Mar 25;15(6):2463-78. doi: 10.1093/nar/15.6.2463.

DOI:10.1093/nar/15.6.2463
PMID:3031599
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC340663/
Abstract

We have cloned and sequenced a 977bp DNA fragment, pXTU6-2, that represents the transcription unit for a Xenopus tropicalis U6 RNA gene. This basic repeating unit is reiterated ca.500-fold per haploid genome. Oocyte injections of pXTU6-2 led to the transcription of a mature-sized U6 RNA that, however, lacked internal 2'-O-methylations. These posttranscriptional modifications of U6 RNA might be cytoplasmic and could require its association with U4 RNA to be accomplished. The low alpha- amanitin sensitivity of U6 RNA synthesis in oocytes suggested that U6 RNA is transcribed by RNA polymerase III, consistent with features of the U6 RNA molecule which also contains a Box A- like intragenic control region. Inspection of X. tropicalis, mouse and human U6 DNA upstream sequences revealed the presence of a TATA box as well as of the proximal and enhancer (octamer motif) elements contained in snRNA genes transcribed by RNA polymerase II. We propose that U6 RNAs are synthesized by a specialized transcription complex consisting of RNA polymerase III and transcription factors, some of which are very likely shared with RNA polymerase II promoters.

摘要

我们克隆并测序了一段977bp的DNA片段pXTU6-2,它代表热带爪蟾U6 RNA基因的转录单元。这个基本重复单元在单倍体基因组中约重复500次。将pXTU6-2注射到卵母细胞中可导致成熟大小的U6 RNA转录,然而,该转录产物缺乏内部2'-O-甲基化修饰。U6 RNA的这些转录后修饰可能发生在细胞质中,并且可能需要与U4 RNA结合才能完成。卵母细胞中U6 RNA合成对α-鹅膏蕈碱的低敏感性表明,U6 RNA是由RNA聚合酶III转录的,这与U6 RNA分子的特征一致,该分子还包含一个类似A框的基因内控制区域。对热带爪蟾、小鼠和人类U6 DNA上游序列的检查发现,存在一个TATA框以及由RNA聚合酶II转录的snRNA基因中所含的近端元件和增强子(八聚体基序)元件。我们提出,U6 RNA由一个由RNA聚合酶III和转录因子组成的特殊转录复合体合成,其中一些转录因子很可能与RNA聚合酶II启动子共享。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7558/340663/94a00012a500/nar00250-0076-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7558/340663/ef353fe53f7b/nar00250-0071-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7558/340663/483b4051a0b5/nar00250-0074-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7558/340663/94a00012a500/nar00250-0076-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7558/340663/ef353fe53f7b/nar00250-0071-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7558/340663/483b4051a0b5/nar00250-0074-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7558/340663/94a00012a500/nar00250-0076-a.jpg

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Xenopus tropicalis U6 snRNA genes transcribed by Pol III contain the upstream promoter elements used by Pol II dependent U snRNA genes.由RNA聚合酶III转录的热带爪蟾U6小核RNA基因包含由依赖RNA聚合酶II的U小核RNA基因使用的上游启动子元件。
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A short 5' flanking region containing conserved sequences is required for silkworm alanine tRNA gene activity.短的 5'侧翼区含有保守序列,这对于家蚕丝氨酸 tRNA 基因的活性是必需的。
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真核生物依赖 DNA 的 RNA 聚合酶进行核转录的结构见解。
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Structural basis for m7G-cap hypermethylation of small nuclear, small nucleolar and telomerase RNA by the dimethyltransferase TGS1.二甲基转移酶TGS1对小核RNA、小核仁RNA和端粒酶RNA进行m7G帽超甲基化修饰的结构基础。
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