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非线性网络的状态观测与传感器选择

State observation and sensor selection for nonlinear networks.

作者信息

Haber Aleksandar, Molnar Ferenc, Motter Adilson E

机构信息

Department of Physics and Astronomy, Northwestern University, Evanston, IL 60208 USA, when this research was performed. He is now with the Department of Engineering Science and Physics, City University of New York, College of Staten Island, Staten Island, NY 10314 USA.

Department of Physics and Astronomy, Northwestern University, Evanston, IL 60208 USA.

出版信息

IEEE Trans Control Netw Syst. 2018 Jun;5(2):694-708. doi: 10.1109/TCNS.2017.2728201. Epub 2017 Jul 17.

DOI:10.1109/TCNS.2017.2728201
PMID:30320141
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6178986/
Abstract

A large variety of dynamical systems, such as chemical and biomolecular systems, can be seen as networks of nonlinear entities. Prediction, control, and identification of such nonlinear networks require knowledge of the state of the system. However, network states are usually unknown, and only a fraction of the state variables are directly measurable. The observability problem concerns reconstructing the network state from this limited information. Here, we propose a general optimization-based approach for observing the states of nonlinear networks and for optimally selecting the observed variables. Our results reveal several fundamental limitations in network observability, such as the trade-off between the fraction of observed variables and the observation length on one side, and the estimation error on the other side. We also show that, owing to the crucial role played by the dynamics, purely graph-theoretic observability approaches cannot provide conclusions about one's practical ability to estimate the states. We demonstrate the effectiveness of our methods by finding the key components in biological and combustion reaction networks from which we determine the full system state. Our results can lead to the design of novel sensing principles that can greatly advance prediction and control of the dynamics of such networks.

摘要

各种各样的动力系统,如化学和生物分子系统,都可被视为非线性实体的网络。对此类非线性网络的预测、控制和识别需要了解系统的状态。然而,网络状态通常是未知的,只有一小部分状态变量可直接测量。可观测性问题涉及从这些有限信息中重建网络状态。在此,我们提出一种基于优化的通用方法,用于观测非线性网络的状态并最优地选择观测变量。我们的结果揭示了网络可观测性中的几个基本限制,比如一方面是观测变量的比例与观测长度之间的权衡,另一方面是估计误差。我们还表明,由于动力学所起的关键作用,纯粹的图论可观测性方法无法就估计状态的实际能力得出结论。我们通过找出生物和燃烧反应网络中的关键组件来确定整个系统状态,从而证明了我们方法的有效性。我们的结果可促成新型传感原理的设计,这能极大地推动对此类网络动力学的预测和控制。

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本文引用的文献

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Phys Rev X. 2015 Jan-Mar;5(1). doi: 10.1103/PhysRevX.5.011005. Epub 2015 Jan 23.
2
Control of Stochastic and Induced Switching in Biophysical Networks.生物物理网络中随机和诱导开关的控制
Phys Rev X. 2015 Jul-Sep;5. doi: 10.1103/PhysRevX.5.031036. Epub 2015 Sep 16.
3
Cell fate reprogramming by control of intracellular network dynamics.通过控制细胞内网络动力学实现细胞命运重编程。
PLoS Comput Biol. 2015 Apr 7;11(4):e1004193. doi: 10.1371/journal.pcbi.1004193. eCollection 2015 Apr.
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Realistic control of network dynamics.网络动力学的现实控制。
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Dynamics and control at feedback vertex sets. II: a faithful monitor to determine the diversity of molecular activities in regulatory networks.反馈顶点集的动力学和控制。二:确定调控网络中分子活动多样性的忠实监测器。
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Parametric Bayesian filters for nonlinear stochastic dynamical systems: a survey.非线性随机动力系统的参数贝叶斯滤波器:综述。
IEEE Trans Cybern. 2013 Dec;43(6):1607-24. doi: 10.1109/TSMCC.2012.2230254.
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Sensing combustion intermediates by femtosecond filament excitation.飞秒丝光激发探测燃烧中间体。
Opt Lett. 2013 Apr 15;38(8):1250-2. doi: 10.1364/OL.38.001250.
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