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组装-拆卸与烟草 RuBisCO 激活酶的 ATP 酶循环偶联。

Assembly-disassembly is coupled to the ATPase cycle of tobacco Rubisco activase.

机构信息

From the School of Molecular Sciences.

Center for Bioenergy and Photosynthesis.

出版信息

J Biol Chem. 2018 Dec 14;293(50):19451-19465. doi: 10.1074/jbc.RA118.005047. Epub 2018 Oct 23.

Abstract

The carbon-fixing activity of enzyme ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) is regulated by Rubisco activase (Rca), a ring-forming ATPase that catalyzes inhibitor release. For higher plant Rca, the catalytic roles played by different oligomeric species have remained obscure. Here, we utilized fluorescence-correlation spectroscopy to estimate dissociation constants for the dimer-tetramer, tetramer-hexamer, hexamer-12-mer, and higher-order assembly equilibria of tobacco Rca. A comparison of oligomer composition with ATPase activity provided evidence that assemblies larger than hexamers are hydrolytically inactive. Therefore, supramolecular aggregates may serve as storage forms at low-energy charge. We observed that the tetramer accumulates only when both substrate and product nucleotides are bound. During rapid ATP turnover, about one in six active sites was occupied by ADP, and ∼36% of Rca was tetrameric. The steady-state catalytic rate reached a maximum between 0.5 and 2.5 μm Rca. In this range, significant amounts of dimers, tetramers, and hexamers coexisted, although none could fully account for the observed activity profile. Therefore, we propose that dynamic assembly-disassembly partakes in the ATPase cycle. According to this model, the association of dimers with tetramers generates a hexamer that forms a closed ring at high ATP and magnesium levels. Upon hydrolysis and product release, the toroid breaks open and dissociates into a dimer and tetramer, which may be coupled to Rubisco remodeling. Although a variant bearing the R294V substitution assembled in much the same way, highly stabilized states could be generated by binding of a transition-state analog. A tight-binding pre-hydrolysis state appears to become more accessible in thermally labile Rcas.

摘要

酶核酮糖-1,5-二磷酸羧化酶/加氧酶(Rubisco)的固定碳活性受 Rubisco 激活酶(Rca)的调节,Rca 是一种形成环的 ATP 酶,可催化抑制剂的释放。对于高等植物的 Rca,不同寡聚体物种所发挥的催化作用仍然不清楚。在这里,我们利用荧光相关光谱法来估计烟草 Rca 的二聚体-四聚体、四聚体-六聚体、六聚体-十二聚体以及更高阶组装平衡的离解常数。将寡聚体组成与 ATP 酶活性进行比较的结果为,大于六聚体的组装体是无水解活性的。因此,超分子聚集体可能作为低能量电荷的储存形式。我们观察到,只有当结合了底物和产物核苷酸时,四聚体才会积累。在快速的 ATP 周转过程中,大约有六分之一的活性位点被 ADP 占据,并且约有 36%的 Rca 为四聚体。在 0.5 到 2.5μm Rca 的范围内,达到了最大的稳态催化速率。在这个范围内,虽然没有一种能够完全解释观察到的活性曲线,但大量的二聚体、四聚体和六聚体共存。因此,我们提出,动态组装-解聚参与了 ATP 酶循环。根据该模型,二聚体与四聚体的缔合产生一个六聚体,该六聚体在高 ATP 和镁水平下形成一个闭环。在水解和产物释放后,toroid 打开并解离成二聚体和四聚体,这可能与 Rubisco 重塑相偶联。虽然带有 R294V 取代的变体以大致相同的方式组装,但通过结合过渡态类似物可以产生高度稳定的状态。在热不稳定的 Rcas 中,似乎更容易进入紧密结合的预水解状态。

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