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凝缩蛋白的作用与压缩

Condensin action and compaction.

作者信息

Paul Matthew Robert, Hochwagen Andreas, Ercan Sevinç

机构信息

Department of Biology, New York University, New York, NY, 10003, USA.

Center for Genomics and Systems Biology, New York University, New York, NY, 10003, USA.

出版信息

Curr Genet. 2019 Apr;65(2):407-415. doi: 10.1007/s00294-018-0899-4. Epub 2018 Oct 25.

DOI:10.1007/s00294-018-0899-4
PMID:30361853
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6421088/
Abstract

Condensin is a multi-subunit protein complex that belongs to the family of structural maintenance of chromosomes (SMC) complexes. Condensins regulate chromosome structure in a wide range of processes including chromosome segregation, gene regulation, DNA repair and recombination. Recent research defined the structural features and molecular activities of condensins, but it is unclear how these activities are connected to the multitude of phenotypes and functions attributed to condensins. In this review, we briefly discuss the different molecular mechanisms by which condensins may regulate global chromosome compaction, organization of topologically associated domains, clustering of specific loci such as tRNA genes, rDNA segregation, and gene regulation.

摘要

凝聚素是一种多亚基蛋白复合体,属于染色体结构维持(SMC)复合体家族。凝聚素在包括染色体分离、基因调控、DNA修复和重组在内的广泛过程中调节染色体结构。最近的研究确定了凝聚素的结构特征和分子活性,但尚不清楚这些活性如何与归因于凝聚素的众多表型和功能相关联。在本综述中,我们简要讨论了凝聚素可能调节全局染色体压缩、拓扑相关结构域的组织、特定基因座(如tRNA基因)的聚类、rDNA分离和基因调控的不同分子机制。

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Condensin action and compaction.凝缩蛋白的作用与压缩
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2
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3
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Condensins: universal organizers of chromosomes with diverse functions.凝缩素:具有多种功能的染色体通用组织者。
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本文引用的文献

1
Condensin-Dependent Chromatin Compaction Represses Transcription Globally during Quiescence.凝聚素依赖性染色质紧缩在静止期全局抑制转录。
Mol Cell. 2019 Feb 7;73(3):533-546.e4. doi: 10.1016/j.molcel.2018.11.020. Epub 2018 Dec 27.
2
Cell cycle-resolved chromatin proteomics reveals the extent of mitotic preservation of the genomic regulatory landscape.细胞周期分辨染色质蛋白质组学揭示了有丝分裂过程中基因组调控景观的保存程度。
Nat Commun. 2018 Oct 2;9(1):4048. doi: 10.1038/s41467-018-06007-5.
3
Condensin controls cellular RNA levels through the accurate segregation of chromosomes instead of directly regulating transcription.凝聚素通过准确分离染色体而不是直接调节转录来控制细胞 RNA 水平。
Elife. 2018 Sep 19;7:e38517. doi: 10.7554/eLife.38517.
4
Smchd1 regulates long-range chromatin interactions on the inactive X chromosome and at Hox clusters.Smchd1 调节失活 X 染色体和 Hox 簇上的长距离染色质相互作用。
Nat Struct Mol Biol. 2018 Sep;25(9):766-777. doi: 10.1038/s41594-018-0111-z. Epub 2018 Aug 20.
5
In Vivo Evidence for ATPase-Dependent DNA Translocation by the Bacillus subtilis SMC Condensin Complex.活体内证据表明枯草芽孢杆菌 SMC 凝聚素复合物通过 ATP 酶依赖性 DNA 易位。
Mol Cell. 2018 Sep 6;71(5):841-847.e5. doi: 10.1016/j.molcel.2018.07.006. Epub 2018 Aug 9.
6
Live-Cell Imaging of Chromatin Condensation Dynamics by CRISPR.利用CRISPR对染色质凝聚动力学进行活细胞成像
iScience. 2018 Jun 29;4:216-235. doi: 10.1016/j.isci.2018.06.001. Epub 2018 Jun 5.
7
Phase separated microenvironments inside the cell nucleus are linked to disease and regulate epigenetic state, transcription and RNA processing.细胞核内相分离的微环境与疾病有关,并调节表观遗传状态、转录和 RNA 加工。
Semin Cell Dev Biol. 2019 Jun;90:94-103. doi: 10.1016/j.semcdb.2018.07.001. Epub 2018 Jul 25.
8
Condensin II drives large-scale folding and spatial partitioning of interphase chromosomes in Drosophila nuclei.凝聚素 II 驱动果蝇核内间期染色体的大规模折叠和空间分隔。
PLoS Genet. 2018 Jul 12;14(7):e1007393. doi: 10.1371/journal.pgen.1007393. eCollection 2018 Jul.
9
Condensin Depletion Causes Genome Decompaction Without Altering the Level of Global Gene Expression in .凝缩蛋白耗竭导致基因组解压缩,而不改变全局基因表达水平。
Genetics. 2018 Sep;210(1):331-344. doi: 10.1534/genetics.118.301217. Epub 2018 Jul 3.
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Coactivator condensation at super-enhancers links phase separation and gene control.共激活因子在超级增强子上的凝聚将相分离和基因调控联系起来。
Science. 2018 Jul 27;361(6400). doi: 10.1126/science.aar3958. Epub 2018 Jun 21.