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使用双重聚合酶链反应检测法快速检测小肠结肠炎耶尔森菌O:3血清型。

Rapid detection of Yersinia enterocolitica serotype O:3 using a duplex PCR assay.

作者信息

Rusak Leonardo Alves, de Castro Lisboa Pereira Rodrigo, Freitag Isabelle Geoffroy, Hofer Cristina Barroso, Hofer Ernesto, Asensi Marise Dutra, Vallim Deyse Christina

机构信息

Fundação Oswaldo Cruz, Instituto Oswaldo Cruz, Laboratório de Pesquisa em Infecção Hospitalar, Rio de Janeiro /RJ, Brazil; Fundação Oswaldo Cruz, Instituto Oswaldo Cruz, Laboratório de Zoonoses Bacterianas/Setor Listeria, Rio de Janeiro /RJ, Brazil.

Fundação Oswaldo Cruz, Instituto Oswaldo Cruz, Laboratório de Zoonoses Bacterianas/Setor Listeria, Rio de Janeiro /RJ, Brazil.

出版信息

J Microbiol Methods. 2018 Nov;154:107-111. doi: 10.1016/j.mimet.2018.10.014. Epub 2018 Oct 23.

Abstract

Yersinia enterocolitica, a member of the Enterobacteriaceae family, is a zoonotic agent that causes gastrointestinal diseases and some extraintestinal disorders in humans. Y. enterocolitica ssp. palearctica bioserotype 4/O:3 is the primary pathogenic bioserotype in Europe, where it has a high public health relevance. The isolation and identification of Y. enterocolitica from various sources on selective media have been seldom successful due to several reasons. In an attempt to overcome the problems associated with traditional culture-based methods, we developed a single duplex PCR assay for the detection of Y. enterocolitica ssp. palearctica bioserotype 4/O:3 using DNA extracted from a source. We combined the primer for tufA (elongation factor Tu) with the primer for rfbC (the biosynthesis of the O side chain) in one single reaction, which showed good results when we analyzed 88 Yersinia strains and when it was tested in the DNA from stool samples of two groups of pregnant women, one comprising HIV-positive women and the other comprising of HIV-negative women. Furthermore, the duplex PCR assay was found to be 16 times better in detecting Yersinia spp. in stool samples than the culture-based method. In addition, it was found to be a rapid screening method for the detection of Y. enterocolitica serotype O:3, and it could still detect other Y. enterocolitica serotypes and Yersinia species as well. We anticipate that the duplex PCR assay could be a useful tool for hospital and veterinary surveillance studies on Yersinia worldwide.

摘要

小肠结肠炎耶尔森菌是肠杆菌科的一员,是一种人畜共患病原体,可导致人类胃肠道疾病和一些肠道外疾病。小肠结肠炎耶尔森菌古北区亚种生物血清型4/O:3是欧洲主要的致病生物血清型,在欧洲具有很高的公共卫生相关性。由于多种原因,在选择性培养基上从各种来源分离和鉴定小肠结肠炎耶尔森菌很少成功。为了克服与传统基于培养的方法相关的问题,我们开发了一种单一的双重PCR检测方法,用于检测从小肠结肠炎耶尔森菌古北区亚种生物血清型4/O:3的来源中提取的DNA。我们将tufA(延伸因子Tu)引物与rfbC(O侧链生物合成)引物在一个单一反应中结合,当我们分析88株耶尔森菌菌株以及在两组孕妇的粪便样本DNA中进行测试时,该方法显示出良好的结果,其中一组孕妇为HIV阳性,另一组为HIV阴性。此外,发现双重PCR检测在粪便样本中检测耶尔森菌属方面比基于培养的方法好16倍。此外,它被发现是一种快速筛查方法,用于检测小肠结肠炎耶尔森菌血清型O:3,并且它仍然可以检测其他小肠结肠炎耶尔森菌血清型和耶尔森菌种。我们预计双重PCR检测可能是全球范围内医院和兽医对耶尔森菌进行监测研究的有用工具。

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