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大肠杆菌“Ada蛋白”(O6-甲基鸟嘌呤-DNA甲基转移酶)的快速大规模纯化与鉴定

Rapid, large-scale purification and characterization of 'Ada protein' (O6 methylguanine-DNA methyltransferase) of E. coli.

作者信息

Bhattacharyya D, Tano K, Bunick G J, Uberbacher E C, Behnke W D, Mitra S

机构信息

University of Tennessee Graduate School of Biomedical Sciences, Oak Ridge 37831.

出版信息

Nucleic Acids Res. 1988 Jul 25;16(14A):6397-410. doi: 10.1093/nar/16.14.6397.

DOI:10.1093/nar/16.14.6397
PMID:3041376
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC338304/
Abstract

The E. coli Ada protein (O6-methylguanine-DNA methyltransferase) has been purified using a high-level expression vector with a yield of about 3 mg per liter of E. coli culture. The 39-kDa protein has an extinction coefficient (E280 nm (1%)) of 5.3. Its isoelectric point of 7.1 is lower than that predicted from the amino acid content. The homogeneous Ada protein is fully active as a methyl acceptor from O6-methylguanine in DNA. Its reaction with O6-methylguanine in a synthetic DNA has a second-order rate constant of 1.1 x 10(9) M-1 min-1 at O degree C. Both the native form and the protein methylated at Cys-69 are monomeric. The CD spectrum suggests a low alpha-helical content and the radius of gyration of 23 A indicates a compact, globular shape. The middle region of the protein is sensitive to a variety of proteases, including an endogenous activity in E. coli, suggesting that the protein is composed of N-terminal and C-terminal domains connected by a hinge region. E. coli B has a higher level of this protease than does K12.

摘要

大肠杆菌Ada蛋白(O6-甲基鸟嘌呤-DNA甲基转移酶)已使用高表达载体进行纯化,每升大肠杆菌培养物的产量约为3毫克。这种39千道尔顿的蛋白质的消光系数(E280 nm(1%))为5.3。其等电点为7.1,低于根据氨基酸含量预测的值。均一的Ada蛋白作为DNA中O6-甲基鸟嘌呤的甲基受体具有完全活性。在0℃下,它与合成DNA中的O6-甲基鸟嘌呤反应的二级速率常数为1.1×10⁹ M⁻¹ min⁻¹。天然形式和在半胱氨酸-69处甲基化的蛋白均为单体。圆二色谱表明α-螺旋含量较低,回转半径为23埃表明其形状紧凑、呈球状。该蛋白的中间区域对多种蛋白酶敏感,包括大肠杆菌中的一种内源性活性蛋白酶,这表明该蛋白由通过铰链区连接的N端和C端结构域组成。大肠杆菌B中的这种蛋白酶水平高于K12。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8e84/338304/839605217b68/nar00167-0152-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8e84/338304/cc117b9bfdb8/nar00167-0148-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8e84/338304/839605217b68/nar00167-0152-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8e84/338304/cc117b9bfdb8/nar00167-0148-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8e84/338304/839605217b68/nar00167-0152-a.jpg

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引用本文的文献

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3
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本文引用的文献

1
Induction of a DNA glycosylase for N-methylated purines is part of the adaptive response to alkylating agents.诱导一种针对N-甲基化嘌呤的DNA糖基化酶是对烷化剂适应性反应的一部分。
Nature. 1982 Apr 22;296(5859):770-3. doi: 10.1038/296770a0.
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Demethylation of O6-methylguanine in a synthetic DNA polymer by an inducible activity in Escherichia coli.通过大肠杆菌中的诱导活性对合成DNA聚合物中的O6-甲基鸟嘌呤进行去甲基化。
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Isolation and structural characterization of a cDNA clone encoding the human DNA repair protein for O6-alkylguanine.编码人O6-烷基鸟嘌呤DNA修复蛋白的cDNA克隆的分离与结构表征
Proc Natl Acad Sci U S A. 1990 Jan;87(2):686-90. doi: 10.1073/pnas.87.2.686.
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Purification to homogeneity and partial amino acid sequence of a fragment which includes the methyl acceptor site of the human DNA repair protein for O6-methylguanine.人O6-甲基鸟嘌呤DNA修复蛋白中包含甲基受体位点的片段的纯化至均一性及部分氨基酸序列分析
Nucleic Acids Res. 1990 Mar 25;18(6):1351-9. doi: 10.1093/nar/18.6.1351.
大肠杆菌中烷基化DNA的修复。甲基从O6-甲基鸟嘌呤转移至蛋白质半胱氨酸残基。
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Quantitation of O6-methylguanine-DNA methyltransferase in HeLa cells.HeLa细胞中O6-甲基鸟嘌呤-DNA甲基转移酶的定量分析。
Mutat Res. 1983 Mar;119(3):221-8. doi: 10.1016/0165-7992(83)90164-1.
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Suicide inactivation of the E. coli O6-methylguanine-DNA methyltransferase.大肠杆菌O6-甲基鸟嘌呤-DNA甲基转移酶的自杀性失活
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Repair of alkylated DNA in Escherichia coli. Physical properties of O6-methylguanine-DNA methyltransferase.大肠杆菌中烷基化DNA的修复。O6-甲基鸟嘌呤-DNA甲基转移酶的物理性质。
J Biol Chem. 1982 Nov 25;257(22):13776-80.
7
Base-pairing properties of O6-methylguanine in template DNA during in vitro DNA replication.体外DNA复制过程中模板DNA中O6-甲基鸟嘌呤的碱基配对特性。
J Biol Chem. 1984 Jul 10;259(13):8095-100.
8
Molecular cloning of a gene which regulates the adaptive response to alkylating agents in Escherichia coli.调控大肠杆菌对烷化剂适应性反应的基因的分子克隆。
Mol Gen Genet. 1983;191(3):466-72. doi: 10.1007/BF00425764.
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Protein-DNA recognition.蛋白质-脱氧核糖核酸识别
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In vivo mutagenesis by O6-methylguanine built into a unique site in a viral genome.通过整合到病毒基因组独特位点的O6-甲基鸟嘌呤进行体内诱变。
Proc Natl Acad Sci U S A. 1984 Oct;81(20):6271-5. doi: 10.1073/pnas.81.20.6271.