Lobo João, Barros-Silva Daniela, Henrique Rui, Jerónimo Carmen
Cancer Biology and Epigenetics Group, Research Center of Portuguese Oncology Institute of Porto (GEBC CI-IPOP), R. Dr. António Bernardino de Almeida, 4200-072 Porto, Portugal.
Department of Pathology, Portuguese Oncology Institute of Porto (IPOP), R. Dr. António Bernardino de Almeida, 4200-072 Porto, Portugal.
Genes (Basel). 2018 Nov 13;9(11):552. doi: 10.3390/genes9110552.
Epitranscriptomics has gained ground in recent years, especially after the advent of techniques for accurately studying these mechanisms. Among all modifications occurring in RNA molecules, N6-methyladenosine (m⁶A) is the most frequent, especially among mRNAs. m⁶A has been demonstrated to play important roles in many physiological processes and several disease states, including various cancer models (from solid to liquid tumors). Tumor cells' epitranscriptome is indeed disrupted in a way to promote cancer-prone features, by means of up/downregulating m⁶A-related players: the so-called writers, readers and erasers. These proteins modulate m⁶A establishment, removal and determine mRNAs fate, acting in a context-dependent manner, so that a single player may act as an oncogenic signal in one tumor model (methyltransferase like 3 (METTL3) in lung cancer) and as a tumor suppressor in another context (METTL3 in glioblastoma). Despite recent advances, however, little attention has been directed towards urological cancer. By means of a thorough analysis of the publicly available TCGA (The Cancer Genome Atlas) database, we disclosed the most relevant players in four major urogenital neoplasms-kidney, bladder, prostate and testicular cancer-for prognostic, subtype discrimination and survival purposes. In all tumor models assessed, the most promising player was shown to be Vir like m⁶A methyltransferase associated (VIRMA), which could constitute a potential target for personalized therapies.
近年来,表观转录组学取得了进展,尤其是在能够精确研究这些机制的技术出现之后。在RNA分子发生的所有修饰中,N6-甲基腺苷(m⁶A)最为常见,尤其是在mRNA中。m⁶A已被证明在许多生理过程和几种疾病状态中发挥重要作用,包括各种癌症模型(从实体瘤到液体肿瘤)。肿瘤细胞的表观转录组确实以一种促进癌症易感性特征的方式被破坏,通过上调/下调与m⁶A相关的因子:即所谓的“书写者”“阅读者”和“擦除者”。这些蛋白质调节m⁶A的建立、去除并决定mRNA的命运,以一种依赖于上下文的方式发挥作用,因此单个因子在一种肿瘤模型中可能作为致癌信号(如肺癌中的甲基转移酶样3(METTL3)),而在另一种情况下可能作为肿瘤抑制因子(如胶质母细胞瘤中的METTL3)。然而,尽管最近有进展,但对泌尿系统癌症的关注却很少。通过对公开可用的TCGA(癌症基因组图谱)数据库进行全面分析,我们揭示了四种主要泌尿生殖系统肿瘤——肾癌、膀胱癌、前列腺癌和睾丸癌——中用于预后、亚型区分和生存目的的最相关因子。在所有评估的肿瘤模型中,最有前景的因子是病毒样m⁶A甲基转移酶相关蛋白(VIRMA),它可能构成个性化治疗的潜在靶点。