Suppr超能文献

首次对从伊朗波斯湾采集的海绵中发现的共生古菌进行分子鉴定。

First Molecular Identification of Symbiotic Archaea in a Sponge Collected from the Persian Gulf, Iran.

作者信息

Najafi Akram, Moradinasab Maryam, Seyedabadi Mohammad, Haghighi Mohammad A, Nabipour Iraj

机构信息

The Persian Gulf Marine Biotechnology Research Center, Bushehr University of Medical Sciences, Bushehr, Iran.

The Persian Gulf Tropical Medicine Research Center, Bushehr University of Medical Sciences, Bushehr, Iran.

出版信息

Open Microbiol J. 2018 Oct 17;12:323-332. doi: 10.2174/1874285801812010323. eCollection 2018.

Abstract

BACKGROUND

Marine sponges are associated with numerically vast and phylogenetically diverse microbial communities at different geographical locations. However, little is known about the archaeal diversity of sponges in the Persian Gulf. The present study was aimed to identify the symbiotic archaea with a sponge species gathered from the Persian Gulf, Iran.

METHODS

Sponge sample was collected from a depth of 3 m offshore Bushehr, Persian Gulf, Iran. Metagenomic DNA was extracted using a hexadecyl trimethyl ammonium bromide (CTAB) method. The COI mtDNA marker was used for molecular taxonomy identification of sponge sample. Also, symbiotic archaea were identified using the culture-independent analysis of the gene and PCR- cloning.

RESULTS

In this study, analysis of multilocus DNA marker and morphological characteristics revealed that the sponge species belonged to isolate PG_BU4. PCR cloning and sequencing showed that all of the sequences of archaeal gene libraries clustered into the uncultured archaeal group.

CONCLUSION

The present study is the first report of the presence of the genus of in the Persian Gulf. Traditional taxonomy methods, when used along with molecular techniques, could play a significant role in the accurate taxonomy of sponges. Also, the uncultured archaea may promise a potential source for bioactive compounds. Further functional studies are needed to explore the role of the sponge-associated uncultured archaea as a part of the marine symbiosis.

摘要

背景

海洋海绵在不同地理位置与数量庞大且系统发育多样的微生物群落相关联。然而,对于波斯湾海绵的古菌多样性知之甚少。本研究旨在鉴定从伊朗波斯湾采集的一种海绵物种的共生古菌。

方法

海绵样本采集自伊朗波斯湾布什尔近海3米深处。使用十六烷基三甲基溴化铵(CTAB)法提取宏基因组DNA。COI线粒体DNA标记用于海绵样本的分子分类鉴定。此外,通过对基因的非培养分析和PCR克隆来鉴定共生古菌。

结果

在本研究中,多位点DNA标记和形态特征分析表明,该海绵物种属于分离株PG_BU4。PCR克隆和测序显示,古菌基因文库的所有序列都聚类到未培养的古菌群中。

结论

本研究是波斯湾存在该属的首次报道。传统分类方法与分子技术结合使用时,可在海绵的准确分类中发挥重要作用。此外,未培养的古菌可能是生物活性化合物的潜在来源。需要进一步的功能研究来探索海绵相关未培养古菌作为海洋共生一部分的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/56b3/6198412/96b14da94db8/TOMICROJ-12-323_F1.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验