College of Biotechnology and Bioengineering, Zhejiang University of Technology, Hangzhou 310014, China.
Int J Mol Sci. 2018 Nov 18;19(11):3636. doi: 10.3390/ijms19113636.
bstract Quorum sensing (QS) enables single-celled bacteria to communicate with chemical signals in order to synchronize group-level bacterial behavior. are marine bacteria found in versatile environments, of which QS regulation for their habitat adaptation is extremely fragmentary. To distinguish genes required for QS regulation in s, comparative genomics was deployed to define the pan-genomics for twelve isolates and previously-sequenced genomes, of which acyl-homoserine lactone (AHL)-based QS traits were characterized. Additionally, transposon mutagenesis was used to identify the essential QS regulatory genes in the selected isolate. A remarkable feature showed that AHL-based colorization intensity of biosensors induced by most likely correlates with QS regulators genetic heterogeneity within the genus. This is supported by the relative expression levels of two of the main QS regulatory genes ( and ) analyzed in representative isolates. Notably, comprehensive QS regulatory schema and the working model proposed in s seem to phylogenetically include the network architectures derived from , and . Several associated genes were mapped by transposon mutagenesis. Among them, a right origin-binding protein-encoding gene () was functionally identified as a positive QS regulatory gene. This gene lies on a genomic instable region and exists in the aforementioned bioinformatically recruited QS regulatory schema. The obtained data emphasize that the distinctly- and hierarchically-organized mechanisms probably target QS association in s dynamic genomes, thus leading to bacterial ability to accommodate their adaption fitness and survival advantages.
摘要 群体感应(QS)使单细胞细菌能够通过化学信号进行通信,以同步群体水平的细菌行为。海洋细菌存在于多种环境中,其对栖息地适应的 QS 调节极其零碎。为了区分 s 中 QS 调节所需的基因,采用比较基因组学来定义十二个分离株和以前测序的基因组的泛基因组,其中酰基高丝氨酸内酯(AHL)为基础的 QS 特征得到了表征。此外,还使用转座子诱变来鉴定所选 分离株中必需的 QS 调节基因。一个显著的特征表明,生物传感器由 诱导的基于 AHL 的显色强度很可能与该属内 QS 调节基因的遗传异质性相关。这得到了在代表性 分离株中分析的两个主要 QS 调节基因(和)的相对表达水平的支持。值得注意的是,在 s 中提出的全面 QS 调节方案和工作模型似乎在系统发育上包括了从 、 和 衍生的网络架构。通过转座子诱变映射了几个相关基因。其中,一个右起始结合蛋白编码基因()被功能鉴定为正 QS 调节基因。该基因位于基因组不稳定区域,存在于上述生物信息学招募的 QS 调节方案中。获得的数据强调了在 s 动态基因组中,QS 关联可能具有明显的和分层组织的机制,从而导致细菌适应其适应能力和生存优势的能力。