• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

RNA聚合酶II介导的转录会引起酵母中DNA拓扑结构的变化。

Transcription by RNA polymerase II induces changes of DNA topology in yeast.

作者信息

Osborne B I, Guarente L

机构信息

Massachusetts Institute of Technology, Department of Biology, Cambridge 02139.

出版信息

Genes Dev. 1988 Jun;2(6):766-72. doi: 10.1101/gad.2.6.766.

DOI:10.1101/gad.2.6.766
PMID:3047008
Abstract

We show that induction of transcription of a CYC1-lacZ fusion gene, borne on a yeast plasmid, causes an increase in negative superhelicity of approximately five turns. This increase is abolished by deletion of either essential element of the CYC1 promoter, the upstream activation site (UAS), or the TATA boxes. Several experiments indicate that the size of the increase is proportional to the size of the transcribed region. First, an internal deletion removing half of the CYC1-lacZ transcribed region results in a plasmid whose negative superhelicity on induction is intermediate between promoter-deletion plasmids and the parental plasmid. Second, plasmids bearing insertions of a fragment containing the putative CYC1 terminator into the CYC1-lacZ fusion gene have relative negative superhelicities proportional to the length of the truncated fusion transcripts generated. A plausible model explaining these observations is that local unwinding of the double helix by transcribing RNA polymerase generates positively supercoiled DNA, which is subsequently relaxed by a topoisomerase.

摘要

我们发现,酵母质粒携带的CYC1-lacZ融合基因转录的诱导会导致负超螺旋增加约五圈。CYC1启动子的任何一个必需元件,即上游激活位点(UAS)或TATA框的缺失,都会消除这种增加。几个实验表明,增加的幅度与转录区域的大小成正比。首先,内部缺失CYC1-lacZ转录区域的一半会产生一种质粒,其诱导时的负超螺旋介于启动子缺失质粒和亲本质粒之间。其次,携带将包含推定的CYC1终止子的片段插入CYC1-lacZ融合基因的质粒,其相对负超螺旋与产生的截短融合转录本的长度成正比。一个解释这些观察结果的合理模型是,转录RNA聚合酶使双螺旋局部解旋产生正超螺旋DNA,随后由拓扑异构酶使其松弛。

相似文献

1
Transcription by RNA polymerase II induces changes of DNA topology in yeast.RNA聚合酶II介导的转录会引起酵母中DNA拓扑结构的变化。
Genes Dev. 1988 Jun;2(6):766-72. doi: 10.1101/gad.2.6.766.
2
An initiation element in the yeast CUP1 promoter is recognized by RNA polymerase II in the absence of TATA box-binding protein if the DNA is negatively supercoiled.如果DNA为负超螺旋状态,酵母CUP1启动子中的起始元件在没有TATA盒结合蛋白的情况下也能被RNA聚合酶II识别。
Proc Natl Acad Sci U S A. 2000 Sep 26;97(20):10745-50. doi: 10.1073/pnas.200365097.
3
Tripartite upstream promoter element essential for expression of Saccharomyces cerevisiae ribosomal protein genes.酿酒酵母核糖体蛋白基因表达所必需的三方上游启动子元件。
Mol Cell Biol. 1986 Feb;6(2):674-87. doi: 10.1128/mcb.6.2.674-687.1986.
4
A regulatory region responsible for proline-specific induction of the yeast PUT2 gene is adjacent to its TATA box.负责酵母PUT2基因脯氨酸特异性诱导的调控区域与其TATA框相邻。
Mol Cell Biol. 1988 Nov;8(11):4634-41. doi: 10.1128/mcb.8.11.4634-4641.1988.
5
Foreign transcriptional enhancers in yeast. II. Interplay of the polyomavirus transcriptional enhancer and Saccharomyces cerevisiae promoter elements.
Nucleic Acids Res. 1988 Sep 26;16(18):8869-86. doi: 10.1093/nar/16.18.8869.
6
Structural features of the DNA template required for transcription in vitro by yeast RNA polymerase B (II).酵母RNA聚合酶B(II)体外转录所需DNA模板的结构特征。
Eur J Biochem. 1986 Feb 17;155(1):69-75. doi: 10.1111/j.1432-1033.1986.tb09459.x.
7
DNA unwinding in the CYC1 and DED1 yeast promoters.酵母CYC1和DED1启动子中的DNA解旋
Gene. 1998 Dec 28;225(1-2):153-62. doi: 10.1016/s0378-1119(98)00525-3.
8
Upstream activation sites of the CYC1 gene of Saccharomyces cerevisiae are active when inverted but not when placed downstream of the "TATA box".酿酒酵母CYC1基因的上游激活位点在倒置时具有活性,但置于“TATA框”下游时则无活性。
Proc Natl Acad Sci U S A. 1984 Dec;81(24):7860-4. doi: 10.1073/pnas.81.24.7860.
9
Transcription-dependent DNA supercoiling in yeast DNA topoisomerase mutants.酵母DNA拓扑异构酶突变体中转录依赖的DNA超螺旋化
Cell. 1988 Jul 29;54(3):403-11. doi: 10.1016/0092-8674(88)90203-6.
10
Initiation on chromatin templates in a yeast RNA polymerase II transcription system.酵母RNA聚合酶II转录系统中染色质模板上的起始过程。
Genes Dev. 1992 Dec;6(12A):2282-7. doi: 10.1101/gad.6.12a.2282.

引用本文的文献

1
Topological constraints impair RNA polymerase II transcription and causes instability of plasmid-borne convergent genes.拓扑约束会损害 RNA 聚合酶 II 的转录,并导致质粒携带的共线性基因不稳定。
Nucleic Acids Res. 2012 Feb;40(3):1050-64. doi: 10.1093/nar/gkr840. Epub 2011 Oct 13.
2
H3 k36 methylation helps determine the timing of cdc45 association with replication origins.H3K36甲基化有助于确定Cdc45与复制起点结合的时间。
PLoS One. 2009 Jun 12;4(6):e5882. doi: 10.1371/journal.pone.0005882.
3
Fuzzy association rules for biological data analysis: a case study on yeast.
用于生物数据分析的模糊关联规则:以酵母为例的案例研究
BMC Bioinformatics. 2008 Feb 19;9:107. doi: 10.1186/1471-2105-9-107.
4
Role of transcription in plasmid maintenance in the hpr1Delta mutant of Saccharomyces cerevisiae.转录在酿酒酵母hpr1Delta突变体中质粒维持中的作用。
Mol Cell Biol. 2002 Dec;22(24):8763-73. doi: 10.1128/MCB.22.24.8763-8773.2002.
5
The nuclear actin-related protein of Saccharomyces cerevisiae, Act3p/Arp4, interacts with core histones.酿酒酵母的核肌动蛋白相关蛋白Act3p/Arp4与核心组蛋白相互作用。
Mol Biol Cell. 1999 Aug;10(8):2595-605. doi: 10.1091/mbc.10.8.2595.
6
Nascent transcription from the nmt1 and nmt2 genes of Schizosaccharomyces pombe overlaps neighbouring genes.粟酒裂殖酵母的nmt1和nmt2基因的新生转录与相邻基因重叠。
EMBO J. 1998 Jun 1;17(11):3066-77. doi: 10.1093/emboj/17.11.3066.
7
DNA in transcriptionally silent chromatin assumes a distinct topology that is sensitive to cell cycle progression.转录沉默染色质中的DNA呈现出一种对细胞周期进程敏感的独特拓扑结构。
Mol Cell Biol. 1997 Dec;17(12):7077-87. doi: 10.1128/MCB.17.12.7077.
8
Template topology and transcription: chromatin templates relaxed by localized linearization are transcriptionally active in yeast.模板拓扑结构与转录:通过局部线性化松弛的染色质模板在酵母中具有转录活性。
Mol Cell Biol. 1997 May;17(5):2825-34. doi: 10.1128/MCB.17.5.2825.
9
Enhancement of transcription by short alternating C.G tracts incorporated within a Rous sarcoma virus-based chimeric promoter: in vivo studies.通过整合在基于劳氏肉瘤病毒的嵌合启动子内的短交替C.G序列增强转录:体内研究
Mol Gen Genet. 1996 Sep 13;252(3):249-54. doi: 10.1007/BF02173770.
10
Hyper-negative template DNA supercoiling during transcription of the tetracycline-resistance gene in topA mutants is largely constrained in vivo.在topA突变体中,四环素抗性基因转录过程中超负超螺旋模板DNA在体内受到很大限制。
Nucleic Acids Res. 1996 Aug 1;24(15):3093-9. doi: 10.1093/nar/24.15.3093.