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高海拔安第斯湖泊耐 UV 细菌中的光解酶和隐花色素。

Photolyases and Cryptochromes in UV-resistant Bacteria from High-altitude Andean Lakes.

机构信息

Laboratorio de Investigaciones Microbiológicas de Lagunas Andinas (LIMLA), Planta Piloto de Procesos Industriales y Microbiológicos (PROIMI), CCT, CONICET, Tucumán, Argentina.

Centro de Investigaciones y Servicios de Microscopía Electrónica (CISME-CONICET-UNT), CCT, CONICET, Tucumán, Argentina.

出版信息

Photochem Photobiol. 2019 Jan;95(1):315-330. doi: 10.1111/php.13061. Epub 2019 Jan 21.

Abstract

"High-altitude Andean Lakes" (HAAL) are pristine environments harboring poly-extremophilic microbes that show combined adaptations to physical and chemical stress such as large daily ambient thermal amplitude, extreme solar radiation levels, intense dryness, alkalinity, high concentrations of arsenic (up to 200 ppm) and dissolved salts. In this work, we compared the UV resistance profiles, pigment content and photoreactivation abilities of three UV-resistant bacteria isolated from distinct niches from HAALs, that is Acinetobacter sp. Ver3 (water, Lake Verde; 4400 m), Exiguobacterium sp. S17 (stromatolite, Lake Socompa, 3570 m) and Nesterenkonia sp. Act20 (soil, Lake Socompa, 3570 m). UV resistance ability of HAAL's strains indicate a clear adaptation to high radiation exposure encountered in their original habitat, which can be explained by genetic and physiological mechanisms named as the UV-resistome. Thus, the UV-resistome depends on the expression of a diverse set of genes devoted to evading or repairing the damage it provoked direct or indirectly. As pigment extraction and photoreactive assays indicate the presence of photoactive molecules, we characterized more in detail proteins with homology to photolyases/cryptochromes members (CPF). Phylogenetic analyses, sequence comparison and 3D modeling with bona fide CPF members were used to prove the presence of functional domains and key residues in the novel proteins.

摘要

“高海拔安第斯湖泊”(HAAL)是原始环境,拥有多种极端微生物,这些微生物表现出对物理和化学压力的综合适应能力,例如大的日环境温度幅度、极端太阳辐射水平、强烈干燥、碱性、高浓度的砷(高达 200ppm)和溶解盐。在这项工作中,我们比较了从 HAAL 不同生境中分离的三种耐紫外线细菌的紫外线抵抗谱、色素含量和光修复能力,即来自 Verde 湖(4400 米)的不动杆菌属 Ver3(水)、来自 Socompa 湖(3570 米)的极端杆菌属 S17(叠层石)和来自 Socompa 湖(3570 米)的土壤的内斯泰尔诺尼亚属 Act20。HAAL 菌株的耐紫外线能力表明,它们对其原始栖息地中遇到的高辐射暴露有明显的适应能力,这可以用称为 UV 抵抗组的遗传和生理机制来解释。因此,UV 抵抗组取决于一组不同的基因的表达,这些基因致力于逃避或修复直接或间接引起的损伤。由于色素提取和光修复测定表明存在光活性分子,我们更详细地研究了与光解酶/隐花色素成员(CPF)同源的蛋白质。系统发育分析、序列比较和与真实 CPF 成员的 3D 建模用于证明新蛋白中存在功能域和关键残基。

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