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蝶蛹:一种用于高通量组织细胞计量学分析图像和电影的新方法。

Chrysalis: A New Method for High-Throughput Histo-Cytometry Analysis of Images and Movies.

机构信息

Center for Immunology, University of Minnesota, Minneapolis, MN 55455;

Department of Microbiology and Immunology, University of Minnesota, Minneapolis, MN 55455.

出版信息

J Immunol. 2019 Jan 1;202(1):300-308. doi: 10.4049/jimmunol.1801202. Epub 2018 Dec 3.

DOI:10.4049/jimmunol.1801202
PMID:30510065
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC6310099/
Abstract

Advances in imaging have led to the development of powerful multispectral, quantitative imaging techniques, like histo-cytometry. The utility of this approach is limited, however, by the need for time consuming manual image analysis. We therefore developed the software Chrysalis and a group of Imaris Xtensions to automate this process. The resulting automation allowed for high-throughput histo-cytometry analysis of three-dimensional confocal microscopy and two-photon time-lapse images of T cell-dendritic cell interactions in mouse spleens. It was also applied to epi-fluorescence images to quantify T cell localization within splenic tissue by using a "signal absorption" strategy that avoids computationally intensive distance measurements. In summary, this image processing and analysis software makes histo-cytometry more useful for immunology applications by automating image analysis.

摘要

成像技术的进步催生了强大的多光谱、定量成像技术,如组织细胞计量术。然而,这种方法的实用性受到耗时的手动图像分析的限制。因此,我们开发了 Chrysalis 软件和一组 Imaris Xtensions 来实现这个过程的自动化。这种自动化实现了高通量的三维共聚焦显微镜和小鼠脾脏中 T 细胞-树突状细胞相互作用的双光子延时成像的组织细胞计量术分析。它也被应用于荧光图像,通过使用避免计算密集型距离测量的“信号吸收”策略来量化 T 细胞在脾组织中的定位。总之,这种图像处理和分析软件通过自动化图像分析,使组织细胞计量术在免疫学应用中更加有用。

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Multicolor quantitative confocal imaging cytometry.多色定量共聚焦成像细胞计量术。
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Dendritic cell and antigen dispersal landscapes regulate T cell immunity.树突状细胞和抗原扩散格局调节T细胞免疫。
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