嗜热栖热氢单胞菌TH-1的全基因组序列，一种中度嗜热兼性化能自养型氢氧化细菌。
Complete Genome Sequence of a Moderately Thermophilic Facultative Chemolithoautotrophic Hydrogen-Oxidizing Bacterium, Hydrogenophilus thermoluteolus TH-1.
作者信息
Arai Hiroyuki, Shomura Yasuhito, Higuchi Yoshiki, Ishii Masaharu
机构信息
Department of Biotechnology, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Bunkyo-ku, Tokyo, Japan.
Collaborative Research Institute for Innovative Microbiology, The University of Tokyo, Bunkyo-ku, Tokyo, Japan.
出版信息
Microbiol Resour Announc. 2018 Aug 16;7(6). doi: 10.1128/MRA.00857-18. eCollection 2018 Aug.
Abstract
Hydrogenophilus spp., which are moderately thermophilic aerobic betaproteobacteria, are widely distributed in geothermal environments. They fix carbon dioxide via the Calvin-Benson-Bassham cycle and exhibit rapid autotrophic growth using hydrogen as an energy source. Here, we report the complete genome sequence of Hydrogenophilus thermoluteolus strain TH-1.
摘要
嗜氢菌属是中度嗜热的需氧β-变形菌，广泛分布于地热环境中。它们通过卡尔文-本森-巴斯姆循环固定二氧化碳，并以氢气作为能源表现出快速的自养生长。在此，我们报告嗜热栖热嗜氢菌菌株TH-1的完整基因组序列。
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2
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Nucleic Acids Res. 2016 Jul 8;44(W1):W54-7. doi: 10.1093/nar/gkw413. Epub 2016 May 12.
3
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4
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5
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