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miRNA-126-3p 和 miRNA-126-5p 在肺腺癌组织中的表达水平及共靶标:基于 RT-qPCR、微阵列和生物信息学分析的探索。

Expression levels and co‑targets of miRNA‑126‑3p and miRNA‑126‑5p in lung adenocarcinoma tissues: Αn exploration with RT‑qPCR, microarray and bioinformatic analyses.

机构信息

Department of Pathology, First Affiliated Hospital of Guangxi Medical University, Nanning, Guangxi Zhuang Autonomous Region 530021, P.R. China.

Department of Medical Oncology, First Affiliated Hospital of Guangxi Medical University, Nanning, Guangxi Zhuang Autonomous Region 530021, P.R. China.

出版信息

Oncol Rep. 2019 Feb;41(2):939-953. doi: 10.3892/or.2018.6901. Epub 2018 Dec 4.

Abstract

Lung adenocarcinoma (LUAD) is the most common histological subtype of lung cancer. Previous studies have found that many microRNAs (miRNAs), including miRNA‑126‑3p, may play a critical role in the development of LUAD. However, no study of LUAD has researched the synergistic effects and co‑targets of both miRNA‑126‑3p and miRNA‑126‑5p. The present study used real‑time quantitative polymerase chain reaction (RT‑qPCR) to explore the expression values of miRNA‑126‑3p and miRNA‑126‑5p in 101 LUAD and 101 normal lung tissues. Ten relevant microarray datasets were screened to further validate the expression levels of miRNA‑126‑3p and ‑5p in LUAD. Twelve prediction tools were employed to obtain potential targets of miRNA‑126‑3p and miRNA‑126‑5p. The results showed that both miRNA‑126‑3p and ‑5p were expressed significantly lower in LUAD. A significant positive correlation was also present between miRNA‑126‑3p and ‑5p expression in LUAD. In addition, lower expression of miRNA‑126‑3p and ‑5p was indicative of vascular invasion, lymph node metastasis (LNM), and a later tumor/node/metastasis (TNM) stage of LUAD. The authors obtained 167 targets of miRNA‑126‑3p and 212 targets of miRNA‑126‑5p; 44 targets were co‑targets of both. Eight co‑target genes (IGF2BP1, TRPM8, DUSP4, SOX11, PLOD2, LIN28A, LIN28B and SLC7A11) were initially identified as key genes in LUAD. The results of the present study indicated that the co‑regulation of miRNA‑126‑3p and miRNA‑126‑5p plays a key role in the development of LUAD, which also suggests a fail‑proof mode between miRNA‑3p and miRNA‑126‑5p.

摘要

肺腺癌(LUAD)是肺癌最常见的组织学亚型。先前的研究发现,许多 microRNA(miRNA),包括 miRNA-126-3p,可能在 LUAD 的发展中发挥关键作用。然而,尚无研究探讨 miRNA-126-3p 和 miRNA-126-5p 两者的协同作用和共同靶点。本研究采用实时定量聚合酶链反应(RT-qPCR)方法检测 101 例 LUAD 组织和 101 例正常肺组织中 miRNA-126-3p 和 miRNA-126-5p 的表达值。筛选了 10 个相关的微阵列数据集以进一步验证 LUAD 中 miRNA-126-3p 和 -5p 的表达水平。使用 12 种预测工具获取 miRNA-126-3p 和 miRNA-126-5p 的潜在靶标。结果显示,LUAD 中 miRNA-126-3p 和 -5p 的表达均显著降低。LUAD 中 miRNA-126-3p 和 -5p 的表达之间还存在显著的正相关关系。此外,miRNA-126-3p 和 -5p 表达降低与 LUAD 的血管侵犯、淋巴结转移(LNM)和较晚的肿瘤/淋巴结/转移(TNM)分期有关。作者获得了 miRNA-126-3p 的 167 个靶标和 miRNA-126-5p 的 212 个靶标,其中 44 个靶标是两者的共同靶标。初步确定了 8 个共同靶基因(IGF2BP1、TRPM8、DUSP4、SOX11、PLOD2、LIN28A、LIN28B 和 SLC7A11)为 LUAD 中的关键基因。本研究结果表明,miRNA-126-3p 和 miRNA-126-5p 的共同调节在 LUAD 的发展中起关键作用,这也表明 miRNA-3p 和 miRNA-126-5p 之间存在一种可靠的模式。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8959/6313014/c4ce9b02abfe/OR-41-02-0939-g00.jpg

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