• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

利用生物信息学方法综合分析低级别胶质瘤中的 PLOD 家族成员。

Comprehensive analysis of PLOD family members in low-grade gliomas using bioinformatics methods.

机构信息

Department of Neurosurgery, Cangzhou Central Hospital, Cangzhou, Hebei, People's Republic of China.

出版信息

PLoS One. 2021 Jan 27;16(1):e0246097. doi: 10.1371/journal.pone.0246097. eCollection 2021.

DOI:10.1371/journal.pone.0246097
PMID:33503035
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7840023/
Abstract

Low-grade gliomas (LGGs) is a primary invasive brain tumor that grows slowly but is incurable and eventually develops into high malignant glioma. Novel biomarkers for the tumorigenesis and lifetime of LGG are critically demanded to be investigated. In this study, the expression levels of procollagen-lysine, 2-oxoglutarate 5-dioxygenases (PLODs) were analyzed by ONCOMINE, HPA and GEPIA. The GEPIA online platform was applied to evaluate the interrelation between PLODs and survival index in LGG. Furthermore, functions of PLODs and co-expression genes were inspected by the DAVID. Moreover, we used TIMER, cBioportal, GeneMINIA and NetworkAnalyst analysis to reveal the mechanism of PLODs in LGG. We found that expression levels of each PLOD family members were up-regulated in patients with LGG. Higher expression of PLODs was closely related to shorter disease-free survival (DFS) and overall survival (OS). The findings showed that LGG cases with or without alterations were significantly correlated with the OS and DFS. The mechanism of PLODs in LGG may be involved in response to hypoxia, oxidoreductase activity, Lysine degradation and immune cell infiltration. In general, this research has investigated the values of PLODs in LGG, which could serve as biomarkers for diagnosis, prognosis and potential therapeutic targets of LGG patients.

摘要

低级别胶质瘤(LGG)是一种原发性侵袭性脑肿瘤,生长缓慢,但无法治愈,最终会发展成高度恶性胶质瘤。因此,迫切需要研究用于肿瘤发生和 LGG 患者生存期的新型生物标志物。在这项研究中,通过 ONCOMINE、HPA 和 GEPIA 分析了前胶原赖氨酸、2-氧戊二酸 5-双加氧酶(PLOD)的表达水平。应用 GEPIA 在线平台评估了 PLOD 与 LGG 生存指数之间的关系。此外,通过 DAVID 检查了 PLOD 的功能和共表达基因。还使用了 TIMER、cBioportal、GeneMINIA 和 NetworkAnalyst 分析来揭示 PLOD 在 LGG 中的作用机制。结果发现,每个 PLOD 家族成员的表达水平在 LGG 患者中均上调。PLOD 的高表达与无病生存期(DFS)和总生存期(OS)较短密切相关。结果表明,有无改变的 LGG 病例与 OS 和 DFS 显著相关。PLOD 在 LGG 中的作用机制可能涉及对缺氧、氧化还原酶活性、赖氨酸降解和免疫细胞浸润的反应。总的来说,这项研究调查了 PLOD 在 LGG 中的价值,它可以作为 LGG 患者诊断、预后和潜在治疗靶点的生物标志物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8831/7840023/11d3f07e6409/pone.0246097.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8831/7840023/d0587440f977/pone.0246097.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8831/7840023/7a561ab565f4/pone.0246097.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8831/7840023/daf01af6e370/pone.0246097.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8831/7840023/c7dd4fd03c39/pone.0246097.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8831/7840023/0237f82da613/pone.0246097.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8831/7840023/11d3f07e6409/pone.0246097.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8831/7840023/d0587440f977/pone.0246097.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8831/7840023/7a561ab565f4/pone.0246097.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8831/7840023/daf01af6e370/pone.0246097.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8831/7840023/c7dd4fd03c39/pone.0246097.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8831/7840023/0237f82da613/pone.0246097.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8831/7840023/11d3f07e6409/pone.0246097.g006.jpg

相似文献

1
Comprehensive analysis of PLOD family members in low-grade gliomas using bioinformatics methods.利用生物信息学方法综合分析低级别胶质瘤中的 PLOD 家族成员。
PLoS One. 2021 Jan 27;16(1):e0246097. doi: 10.1371/journal.pone.0246097. eCollection 2021.
2
Bioinformatic analysis of PLOD family member expression and prognostic value in non-small cell lung cancer.PLOD家族成员在非小细胞肺癌中的表达及预后价值的生物信息学分析
Transl Cancer Res. 2021 Jun;10(6):2707-2724. doi: 10.21037/tcr-21-73.
3
Systematic characterization of the expression, prognosis and immune characteristics of PLOD family genes in breast cancer.系统分析 PLOD 家族基因在乳腺癌中的表达、预后和免疫特征。
Aging (Albany NY). 2024 Jul 26;16(14):11434-11445. doi: 10.18632/aging.206029.
4
Comprehensive Analysis of the Expression, Prognosis, and Biological Significance of PLOD Family in Bladder Cancer.膀胱癌中PLOD家族的表达、预后及生物学意义的综合分析
Int J Gen Med. 2023 Feb 24;16:707-722. doi: 10.2147/IJGM.S399875. eCollection 2023.
5
SYT16 is a prognostic biomarker and correlated with immune infiltrates in glioma: A study based on TCGA data.SYT16 是胶质母细胞瘤的预后生物标志物,并与免疫浸润相关:基于 TCGA 数据的研究。
Int Immunopharmacol. 2020 Jul;84:106490. doi: 10.1016/j.intimp.2020.106490. Epub 2020 Apr 11.
6
Serine Incorporator 2 (SERINC2) Expression Predicts an Unfavorable Prognosis of Low-Grade Glioma (LGG): Evidence from Bioinformatics Analysis.丝氨酸掺入因子 2(SERINC2)表达预测低级别胶质瘤(LGG)的不良预后:来自生物信息学分析的证据。
J Mol Neurosci. 2020 Oct;70(10):1521-1532. doi: 10.1007/s12031-020-01620-w. Epub 2020 Jul 8.
7
Procollagen-Lysine, 2-Oxoglutarate 5-Dioxygenase Family: Novel Prognostic Biomarkers and Tumor Microenvironment Regulators for Lower-Grade Glioma.前胶原赖氨酸2-氧戊二酸5-双加氧酶家族:低级别胶质瘤的新型预后生物标志物和肿瘤微环境调节因子
Front Cell Neurosci. 2022 Feb 18;16:838548. doi: 10.3389/fncel.2022.838548. eCollection 2022.
8
Next-generation sequencing identifies HOXA6 as a novel oncogenic gene in low grade glioma.下一代测序确定 HOXA6 为低级别胶质瘤中的一种新型致癌基因。
Aging (Albany NY). 2022 Mar 29;14(6):2819-2854. doi: 10.18632/aging.203977.
9
SHOX2 is a Potent Independent Biomarker to Predict Survival of WHO Grade II-III Diffuse Gliomas.SHOX2是预测世界卫生组织II-III级弥漫性胶质瘤患者生存的有效独立生物标志物。
EBioMedicine. 2016 Nov;13:80-89. doi: 10.1016/j.ebiom.2016.10.040. Epub 2016 Oct 28.
10
Overexpressing PLOD Family Genes Predict Poor Prognosis in Pancreatic Cancer.过表达赖氨酰氧化酶样蛋白(PLOD)家族基因预示胰腺癌预后不良。
Int J Gen Med. 2022 Mar 17;15:3077-3096. doi: 10.2147/IJGM.S341332. eCollection 2022.

引用本文的文献

1
Design and Computational Analysis of an MMP9 Inhibitor in Hypoxia-Induced Glioblastoma Multiforme.缺氧诱导的多形性胶质母细胞瘤中MMP9抑制剂的设计与计算分析
ACS Omega. 2023 Mar 13;8(11):10565-10590. doi: 10.1021/acsomega.3c00441. eCollection 2023 Mar 21.
2
A Fe-dependent self-inhibited state influences the druggability of human collagen lysyl hydroxylase (LH/PLOD) enzymes.铁依赖性自我抑制状态影响人类胶原蛋白赖氨酸羟化酶(LH/PLOD)的可成药性。
Front Mol Biosci. 2022 Aug 25;9:876352. doi: 10.3389/fmolb.2022.876352. eCollection 2022.
3
Clinical Prognostic Value of the Gene Family in Lung Adenocarcinoma.

本文引用的文献

1
Glioblastoma precision therapy: From the bench to the clinic.胶质母细胞瘤精准治疗:从实验室到临床。
Cancer Lett. 2020 Apr 10;475:79-91. doi: 10.1016/j.canlet.2020.01.027. Epub 2020 Jan 28.
2
EGFRvIII-CAR-T Cells with PD-1 Knockout Have Improved Anti-Glioma Activity.EGFRvIII-CAR-T 细胞敲除 PD-1 后抗肿瘤活性增强。
Pathol Oncol Res. 2020 Oct;26(4):2135-2141. doi: 10.1007/s12253-019-00759-1. Epub 2020 Jan 27.
3
An update on the CNS manifestations of brain tumor polyposis syndromes.脑肿瘤息肉综合征中枢神经系统表现的最新进展。
基因家族在肺腺癌中的临床预后价值
Front Mol Biosci. 2022 Feb 21;8:770729. doi: 10.3389/fmolb.2021.770729. eCollection 2021.
Acta Neuropathol. 2020 Apr;139(4):703-715. doi: 10.1007/s00401-020-02124-y. Epub 2020 Jan 22.
4
The influence of hypoxia on the prostate cancer proteome.缺氧对前列腺癌蛋白质组的影响。
Clin Chem Lab Med. 2020 Jun 25;58(6):980-993. doi: 10.1515/cclm-2019-0626.
5
Correlation between procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 and breast cancer.原胶原蛋白赖氨酸2-氧代戊二酸5-双加氧酶2与乳腺癌之间的相关性
Int J Clin Exp Pathol. 2019 Mar 1;12(3):1015-1021. eCollection 2019.
6
Overexpressing PLOD family genes predict poor prognosis in gastric cancer.过表达赖氨酰氧化酶家族基因预示胃癌预后不良。
J Cancer. 2020 Jan 1;11(1):121-131. doi: 10.7150/jca.35763. eCollection 2020.
7
A twenty gene-based gene set variation score reflects the pathological progression from cirrhosis to hepatocellular carcinoma.基于20个基因的基因集变异评分反映了从肝硬化到肝细胞癌的病理进展。
Aging (Albany NY). 2019 Dec 6;11(23):11157-11169. doi: 10.18632/aging.102518.
8
[DIFFUSE LOW GRADE GLIOMA: PERSONALIZED ADAPTATION OF SURGICAL RESECTION IN AN ERA OF TARGETED ONCOLOGICAL THERAPY].[弥漫性低级别胶质瘤:靶向肿瘤治疗时代手术切除的个体化调整]
Harefuah. 2019 Sep;158(9):601-606.
9
Tumor-induced DNA methylation in the white blood cells of patients with colorectal cancer.结直肠癌患者白细胞中肿瘤诱导的DNA甲基化
Oncol Lett. 2019 Sep;18(3):3039-3048. doi: 10.3892/ol.2019.10638. Epub 2019 Jul 18.
10
Molecular and cellular intratumoral heterogeneity in primary glioblastoma: clinical and translational implications.原发性胶质母细胞瘤的分子和细胞内肿瘤异质性:临床及转化意义
J Neurosurg. 2019 Aug 23;133(3):655-663. doi: 10.3171/2019.5.JNS19364. Print 2020 Sep 1.