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利用tRNA抑制子探究大肠杆菌释放因子2的调控机制。

Use of tRNA suppressors to probe regulation of Escherichia coli release factor 2.

作者信息

Curran J F, Yarus M

机构信息

Department of Molecular, Cellular and Developmental Biology, University of Colorado, Boulder 80309.

出版信息

J Mol Biol. 1988 Sep 5;203(1):75-83. doi: 10.1016/0022-2836(88)90092-7.

DOI:10.1016/0022-2836(88)90092-7
PMID:3054124
Abstract

It has been suggested that Escherichia coli release factor 2 (RF-2) translation is autoregulated. Mature RF-2 protein can terminate its own nascent synthesis at an intragenic, in-phase UGA codon, or alternatively, a +1 frameshift can occur that leads to completion of the RF-2 polypeptide. Translational termination presumably increases with RF-2 concentration, providing negative regulatory feedback. We now show, in lacZ/RF-2 fusions, that translation of a UAG codon at the position of the UGA competes with frameshifting, which proves one postulate of the translational autoregulatory model. We also identify a nearby sequence that is required for high-frequency frameshifting and suggest a constraint for the codon preceding the shift point. Both these sequences are incorporated into a model for frameshifting. Our measurements allow us to compute the relative rates in vivo of these reactions: release factor action, frameshifting and tRNA selection at an amber codon.

摘要

有人提出,大肠杆菌释放因子2(RF-2)的翻译是自动调节的。成熟的RF-2蛋白可以在基因内的同相位UGA密码子处终止其自身的新生合成,或者,也可能发生+1移码,从而导致RF-2多肽的合成完成。翻译终止可能会随着RF-2浓度的增加而增加,从而提供负调控反馈。我们现在在lacZ/RF-2融合体中表明,UGA位置的UAG密码子的翻译与移码相互竞争,这证明了翻译自动调节模型的一个假设。我们还鉴定出一个高频移码所需的附近序列,并提出了对移码点之前密码子的限制。这两个序列都被纳入了一个移码模型。我们的测量使我们能够计算出这些反应在体内的相对速率:释放因子的作用、移码以及在琥珀密码子处的tRNA选择。

相似文献

1
Use of tRNA suppressors to probe regulation of Escherichia coli release factor 2.利用tRNA抑制子探究大肠杆菌释放因子2的调控机制。
J Mol Biol. 1988 Sep 5;203(1):75-83. doi: 10.1016/0022-2836(88)90092-7.
2
Competition between frameshifting, termination and suppression at the frameshift site in the Escherichia coli release factor-2 mRNA.大肠杆菌释放因子-2 mRNA移码位点处移码、终止和抑制之间的竞争。
Nucleic Acids Res. 1993 Nov 11;21(22):5074-8. doi: 10.1093/nar/21.22.5074.
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Frameshift autoregulation in the gene for Escherichia coli release factor 2: partly functional mutants result in frameshift enhancement.大肠杆菌释放因子2基因中的移码自调控:部分功能性突变体导致移码增强。
Nucleic Acids Res. 1990 Nov 25;18(22):6517-22. doi: 10.1093/nar/18.22.6517.
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Function of polypeptide chain release factor RF-3 in Escherichia coli. RF-3 action in termination is predominantly at UGA-containing stop signals.大肠杆菌中多肽链释放因子RF-3的功能。RF-3在终止过程中的作用主要针对含UGA的终止信号。
J Biol Chem. 1995 May 5;270(18):10595-600. doi: 10.1074/jbc.270.18.10595.
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Frameshifting at the internal stop codon within the mRNA for bacterial release factor-2 on eukaryotic ribosomes.真核生物核糖体上细菌释放因子-2的信使核糖核酸(mRNA)内的内部终止密码子处的移码。
Biochim Biophys Acta. 1990 Aug 27;1050(1-3):283-7. doi: 10.1016/0167-4781(90)90182-2.
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Sequence and functional analysis of mutations in the gene encoding peptide-chain-release factor 2 of Escherichia coli.大肠杆菌肽链释放因子2编码基因突变的序列与功能分析
Biochimie. 1991 Dec;73(12):1509-16. doi: 10.1016/0300-9084(91)90185-4.
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Release factor competition is equivalent at strong and weakly suppressed nonsense codons.释放因子竞争在强抑制和弱抑制的无义密码子处是等效的。
Mol Gen Genet. 1988 Jul;213(1):144-9. doi: 10.1007/BF00333411.
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Expression of peptide chain release factor 2 requires high-efficiency frameshift.肽链释放因子2的表达需要高效移码。
Nature. 1986;322(6076):273-5. doi: 10.1038/322273a0.
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Analysis of effects of tRNA:message stability on frameshift frequency at the Escherichia coli RF2 programmed frameshift site.分析tRNA:信使稳定性对大肠杆菌RF2编程移码位点移码频率的影响。
Nucleic Acids Res. 1993 Apr 25;21(8):1837-43. doi: 10.1093/nar/21.8.1837.
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Functional specificity of amino acid at position 246 in the tRNA mimicry domain of bacterial release factor 2.细菌释放因子2的tRNA模拟结构域中第246位氨基酸的功能特异性
Biochimie. 1996;78(11-12):935-43. doi: 10.1016/s0300-9084(97)86715-6.

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