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散发性结直肠癌中肿瘤抑制因子 BMP5 的改变:基于基因组和转录组特征分析的研究。

Alteration of tumor suppressor BMP5 in sporadic colorectal cancer: a genomic and transcriptomic profiling based study.

机构信息

Institute of Preventive Genomic Medicine, School of Life Sciences, Northwest University, Xian, 710069, China.

Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, School of Life Sciences, Northwest University, Xian, 710069, China.

出版信息

Mol Cancer. 2018 Dec 20;17(1):176. doi: 10.1186/s12943-018-0925-7.

Abstract

BACKGROUND

Although the genetic spectrum of human colorectal cancer (CRC) is mainly characterized by APC, KRAS and TP53 mutations, driver genes in tumor initiation have not been conclusively demonstrated. In this study, we aimed to identify novel markers for CRC.

METHODS

We performed exome analysis of sporadic colorectal cancer (sCRC) coding regions to screen loss of function (LoF) mutation genes, and carried out systems-level approaches to confirm top rank gene in this study.

RESULTS

We identified loss of BMP5 is an early event in CRC. Deep sequencing identified BMP5 was mutated in 7.7% (8/104) of sCRC samples, with 37.5% truncating mutation frequency. Notably, BMP5 negative expression and its prognostic value is uniquely significant in sCRC but not in other tumor types. Furthermore, BMP5 expression was positively correlated with E-cadherin in CRC patients and its dysregulation play a vital role in epithelial-mesenchymal transition (EMT), thus triggering tumor initiation and development. RNA sequencing identified, independent of BMP/Smads pathway, BMP5 signaled though Jak-Stat pathways to inhibit the activation of oncogene EPSTI1.

CONCLUSIONS

Our result support a novel concept that the importance of BMP5 in sCRC. The tumor suppressor role of BMP5 highlights its crucial role in CRC initiation and development.

摘要

背景

尽管人类结直肠癌(CRC)的遗传谱主要以 APC、KRAS 和 TP53 突变为特征,但肿瘤起始的驱动基因尚未得到明确证实。在这项研究中,我们旨在鉴定 CRC 的新标志物。

方法

我们对散发性结直肠癌(sCRC)编码区进行外显子组分析,以筛选功能丧失(LoF)突变基因,并进行系统水平的方法来确认本研究中的顶级基因。

结果

我们发现 BMP5 的缺失是 CRC 的早期事件。深度测序确定 BMP5 在 7.7%(8/104)的 sCRC 样本中发生突变,截短突变频率为 37.5%。值得注意的是,BMP5 阴性表达及其预后价值在 sCRC 中是独特而显著的,而在其他肿瘤类型中则不然。此外,BMP5 表达与 CRC 患者的 E-钙粘蛋白呈正相关,其失调在上皮-间充质转化(EMT)中起着至关重要的作用,从而引发肿瘤的起始和发展。RNA 测序确定,BMP5 通过 Jak-Stat 途径信号传递,而不依赖于 BMP/Smads 途径,以抑制癌基因 EPSTI1 的激活。

结论

我们的结果支持了 BMP5 在 sCRC 中的重要性的新概念。BMP5 的肿瘤抑制作用突出了其在 CRC 起始和发展中的关键作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1a62/6302470/8a0aed351e22/12943_2018_925_Fig1_HTML.jpg

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