一份33年的植物样本贡献了首个完整的基因组序列。 （原文句末不完整，根据已有信息尽量完善翻译）
A 33-Year-Old Plant Sample Contributes the First Complete Genomic Sequence of .
作者信息
Adams Ian P, Boonham Neil, Jones Roger A C
机构信息
Fera Science Ltd., Sand Hutton, York, United Kingdom.
School of Natural and Environmental Sciences, Newcastle University, Newcastle upon Tyne, United Kingdom.
出版信息
Microbiol Resour Announc. 2018 Dec 13;7(23). doi: 10.1128/MRA.01392-18. eCollection 2018 Dec.
Abstract
A isolate detected in a Peruvian potato sample collected in 1977 produced the first genome sequence of this virus. When this genome sequence was compared with those of other nepoviruses, the amino acid sequences of RNA1 and RNA2 were most similar to those of subgroup C nepoviruses.
摘要
1977年从秘鲁采集的一份马铃薯样本中检测到的A分离株产生了该病毒的首个基因组序列。当将该基因组序列与其他线虫传多面体病毒的序列进行比较时，RNA1和RNA2的氨基酸序列与C亚组线虫传多面体病毒的序列最为相似。
相似文献
1
A 33-Year-Old Plant Sample Contributes the First Complete Genomic Sequence of .一份33年的植物样本贡献了首个完整的基因组序列。 （原文句末不完整，根据已有信息尽量完善翻译）
Microbiol Resour Announc. 2018 Dec 13;7(23). doi: 10.1128/MRA.01392-18. eCollection 2018 Dec.
2
First Complete Genome Sequence of Isolated from a 38-Year-Old Sample from Peru.从秘鲁一份38年的样本中分离出的[具体名称未给出]的首个完整基因组序列。
Genome Announc. 2017 May 4;5(18):e00141-17. doi: 10.1128/genomeA.00141-17.
3
The complete genome sequences of two isolates of potato black ringspot virus and their relationship to other isolates and nepoviruses.两种马铃薯黑环斑病毒分离株的全基因组序列及其与其他分离株和线虫传多面体病毒的关系。
Arch Virol. 2014 Apr;159(4):811-5. doi: 10.1007/s00705-013-1871-8.
4
The genomic RNA1 and RNA2 sequences of the tobacco rattle virus isolates found in Polish potato fields.在波兰马铃薯田中发现的烟草脆裂病毒分离株的基因组 RNA1 和 RNA2 序列。
Virus Res. 2014 Jun 24;185:110-3. doi: 10.1016/j.virusres.2014.02.019. Epub 2014 Mar 15.
5
Complete Coding Sequence of from a 40-Year-Old Sample from Peru.来自秘鲁一份40年历史样本的完整编码序列。
Microbiol Resour Announc. 2019 Oct 3;8(40):e00871-19. doi: 10.1128/MRA.00871-19.
6
Complete sequence and variability of a new subgroup B nepovirus infecting potato in central Peru.感染秘鲁中部马铃薯的一种新型B亚组线虫传多面体病毒的全序列及变异性
Arch Virol. 2017 Mar;162(3):885-889. doi: 10.1007/s00705-016-3147-6. Epub 2016 Nov 17.
7
Identification and characterization of blueberry latent spherical virus, a new member of subgroup C in the genus Nepovirus.鉴定和描述蓝莓潜隐病毒，细丽麦病毒属 C 亚组的一个新成员。
Arch Virol. 2012 Feb;157(2):297-303. doi: 10.1007/s00705-011-1177-7. Epub 2011 Nov 23.
8
First Report of Potato yellowing virus (Genus Ilarvirus) in Solanum phureja from Ecuador.马铃薯黄化病毒（番茄斑萎病毒属）在厄瓜多尔费约果茄中的首次报道
Plant Dis. 2011 Mar;95(3):355. doi: 10.1094/PDIS-09-10-0624.
9
Sequence and phylogenetic analysis of the RNA1 and RNA2 segments of Korean Rice stripe virus isolates and comparison with those of China and Japan.韩国稻条纹病毒分离株的 RNA1 和 RNA2 片段的序列和系统发育分析，并与中国和日本的分离株进行比较。
Arch Virol. 2009;154(10):1705-8. doi: 10.1007/s00705-009-0493-7. Epub 2009 Sep 12.
10
Comparison of complete nucleotide sequences and genome organization of six distinct cherry leaf roll virus isolates from New Zealand.来自新西兰的六种不同樱桃卷叶病毒分离株的全核苷酸序列和基因组结构比较。
Arch Virol. 2014 Dec;159(12):3443-5. doi: 10.1007/s00705-014-2196-y. Epub 2014 Aug 5.
引用本文的文献
1
Re-examination of nepovirus polyprotein cleavage sites highlights the diverse specificities and evolutionary relationships of nepovirus 3C-like proteases.重新分析 nepovirus 多聚蛋白切割位点突出了 nepovirus 3C 样蛋白酶的多样化特异性和进化关系。
Arch Virol. 2022 Dec;167(12):2529-2543. doi: 10.1007/s00705-022-05564-x. Epub 2022 Aug 30.
2
Pest categorisation of non-EU viruses and viroids of potato.非欧盟马铃薯病毒和类病毒的有害生物分类
EFSA J. 2020 Jan 9;18(1):e05853. doi: 10.2903/j.efsa.2020.5853. eCollection 2020 Jan.
3
List of non-EU viruses and viroids infecting potato () and other tuber-forming species.感染马铃薯（）及其他形成块茎物种的非欧盟病毒和类病毒清单。 （注：括号内原文缺失相关内容）
EFSA J. 2020 Jan 9;18(1):e05852. doi: 10.2903/j.efsa.2020.5852. eCollection 2020 Jan.
本文引用的文献
1
Complete Genome Sequence of from Bolivia, Obtained from a 33-Year-Old Sample.来自玻利维亚的[具体物种名称未给出]的全基因组序列，取自一份33年的样本。
Microbiol Resour Announc. 2018 Nov 8;7(18). doi: 10.1128/MRA.01066-18. eCollection 2018 Nov.
2
Complete Genomic Sequence of the Potyvirus , Obtained from a 33-Year-Old Mashua () Sample.从一份33岁的玛舒阿（Tropaeolum tuberosum）样本中获得的马铃薯Y病毒完整基因组序列。
Microbiol Resour Announc. 2018 Oct 18;7(15). doi: 10.1128/MRA.01064-18. eCollection 2018 Oct.
3
Virus taxonomy: the database of the International Committee on Taxonomy of Viruses (ICTV).病毒分类学：国际病毒分类委员会（ICTV）数据库。
Nucleic Acids Res. 2018 Jan 4;46(D1):D708-D717. doi: 10.1093/nar/gkx932.
4
First Complete Genome Sequence of Isolated from a 38-Year-Old Sample from Peru.从秘鲁一份38年的样本中分离出的[具体名称未给出]的首个完整基因组序列。
Genome Announc. 2017 May 4;5(18):e00141-17. doi: 10.1128/genomeA.00141-17.
5
Molecular characterization of a new soybean-infecting member of the genus Nepovirus identified by high-throughput sequencing.通过高通量测序鉴定的一种新的感染大豆的线虫传多面体病毒属成员的分子特征
Arch Virol. 2017 Apr;162(4):1089-1092. doi: 10.1007/s00705-016-3152-9. Epub 2016 Dec 5.
6
MEGAN Community Edition - Interactive Exploration and Analysis of Large-Scale Microbiome Sequencing Data.MEGAN社区版 - 大规模微生物组测序数据的交互式探索与分析
PLoS Comput Biol. 2016 Jun 21;12(6):e1004957. doi: 10.1371/journal.pcbi.1004957. eCollection 2016 Jun.
7
CDD: NCBI's conserved domain database.CDD：美国国家生物技术信息中心的保守结构域数据库。
Nucleic Acids Res. 2015 Jan;43(Database issue):D222-6. doi: 10.1093/nar/gku1221. Epub 2014 Nov 20.
8
Identification and characterization of blueberry latent spherical virus, a new member of subgroup C in the genus Nepovirus.鉴定和描述蓝莓潜隐病毒，细丽麦病毒属 C 亚组的一个新成员。
Arch Virol. 2012 Feb;157(2):297-303. doi: 10.1007/s00705-011-1177-7. Epub 2011 Nov 23.
9
Full-length transcriptome assembly from RNA-Seq data without a reference genome.无参考基因组的 RNA-Seq 数据的全长转录组组装。
Nat Biotechnol. 2011 May 15;29(7):644-52. doi: 10.1038/nbt.1883.
10
BLAST+: architecture and applications.BLAST+：体系结构与应用。
BMC Bioinformatics. 2009 Dec 15;10:421. doi: 10.1186/1471-2105-10-421.
Zotero 插件