Gao Ying, Wei Wei, Zhao Xiaodan, Tan Xiaoli, Fan Zhongqi, Zhang Yiping, Jing Yuan, Meng Lanhuan, Zhu Benzhong, Zhu Hongliang, Chen Jianye, Jiang Cai-Zhong, Grierson Donald, Luo Yunbo, Fu Da-Qi
1Laboratory of Fruit Biology, College of Food Science & Nutritional Engineering, China Agricultural University, 100083 Beijing, China.
2College of Horticulture, South China Agricultural University, 510642 Guangzhou, China.
Hortic Res. 2018 Dec 21;5:75. doi: 10.1038/s41438-018-0111-5. eCollection 2018.
Ripening of the model fruit tomato () is controlled by a transcription factor network including NAC (NAM, ATAF1/2, and CUC2) domain proteins such as No-ripening (NOR), SlNAC1, and SlNAC4, but very little is known about the NAC targets or how they regulate ripening. Here, we conducted a systematic search of fruit-expressed NAC genes and showed that silencing (Solyc07g063420) using virus-induced gene silencing (VIGS) inhibited specific aspects of ripening. Ripening initiation was delayed by 14 days when NOR-like1 function was inactivated by CRISPR/Cas9 and fruits showed obviously reduced ethylene production, retarded softening and chlorophyll loss, and reduced lycopene accumulation. RNA-sequencing profiling and gene promoter analysis suggested that genes involved in ethylene biosynthesis (, ), color formation (, ), and cell wall metabolism (, , and ) are direct targets of NOR-like1. Electrophoretic mobility shift assays (EMSA), chromatin immunoprecipitation-quantitative PCR (ChIP-qPCR), and dual-luciferase reporter assay (DLR) confirmed that NOR-like1 bound to the promoters of these genes both in vitro and in vivo, and activated their expression. Our findings demonstrate that NOR-like1 is a new positive regulator of tomato fruit ripening, with an important role in the transcriptional regulatory network.
模式果实番茄()的成熟受转录因子网络控制,该网络包括NAC(NAM、ATAF1/2和CUC2)结构域蛋白,如成熟抑制因子(NOR)、SlNAC1和SlNAC4,但对于NAC靶标或它们如何调控成熟了解甚少。在这里,我们对果实表达的NAC基因进行了系统搜索,并表明利用病毒诱导基因沉默(VIGS)沉默(Solyc07g063420)会抑制成熟的特定方面。当通过CRISPR/Cas9使NOR类1功能失活时,成熟起始延迟了14天,果实乙烯产量明显降低,软化和叶绿素损失延缓,番茄红素积累减少。RNA测序分析和基因启动子分析表明,参与乙烯生物合成(,)、颜色形成(,)和细胞壁代谢(,,和)的基因是NOR类1的直接靶标。电泳迁移率变动分析(EMSA)、染色质免疫沉淀定量PCR(ChIP-qPCR)和双荧光素酶报告基因分析(DLR)证实,NOR类1在体外和体内均与这些基因的启动子结合,并激活它们的表达。我们的研究结果表明,NOR类1是番茄果实成熟的一种新的正向调节因子,在转录调控网络中起重要作用。