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奶牛乳腺组织中 miRNA 谱对热应激的响应特征。

Characterization of miRNA profiles in the mammary tissue of dairy cattle in response to heat stress.

机构信息

Edible and Medicinal Fungi Research and Development Center, College of Life Sciences, Langfang Normal University, Langfang, 065000, People's Republic of China.

Dairy Cattle Research Center, Shandong, Academy of Agricultural Science, Jinan, 250100, People's Republic of China.

出版信息

BMC Genomics. 2018 Dec 28;19(1):975. doi: 10.1186/s12864-018-5298-1.

Abstract

BACKGROUND

MicroRNAs (miRNAs) are a class of small noncoding RNAs that play important roles in the regulation of gene expression. However, the role of miRNAs in bovine mammary gland responses to heat stress is not well understood.

RESULTS

In the present study, we performed a deep RNA sequencing analysis to identify miRNAs associated with the heat stress potential of the bovine mammary gland. We identified 27 miRNAs that were differentially expressed significantly between the mammary tissue of Holstein cattle heat stress and normal conditions. Twenty miRNAs had higher expression in the mammary tissue of heat-stressed Holstein cattle. The seven highest differentially expressed candidate miRNAs (bta-miR-21-5p, bta-miR-99a-5p, bta-miR-146b, bta-miR-145, bta-miR-2285 t, bta-miR-133a, and bta-miR-29c) identified by deep RNA sequencing were additionally evaluated by stem-loop qPCR. Enrichment analyses for targeted genes revealed that the major differences between miRNAs expression in the mammary gland of heat-stressed versus control were associated with the regulation of Wnt, TGF-β, MAPK, Notch, and JAK-STAT.

CONCLUSIONS

These data indicated that the differentially expressed miRNAs identified in this study may act as dominant regulators during heat stress. We might reduce heat stress damage of Holstein cows by up-regulating or down-regulating these differentially expressed miRNAs.

摘要

背景

MicroRNAs (miRNAs) 是一类小的非编码 RNA,在基因表达调控中发挥着重要作用。然而,miRNAs 在奶牛乳腺对热应激的反应中的作用尚不清楚。

结果

本研究通过深度 RNA 测序分析,鉴定了与奶牛乳腺热应激潜力相关的 miRNAs。我们鉴定出 27 个在荷斯坦奶牛乳腺组织中差异表达显著的 miRNAs。20 个 miRNAs 在热应激荷斯坦奶牛乳腺组织中表达较高。通过深度 RNA 测序鉴定的 7 个差异表达候选 miRNAs(bta-miR-21-5p、bta-miR-99a-5p、bta-miR-146b、bta-miR-145、bta-miR-2285 t、bta-miR-133a 和 bta-miR-29c)通过茎环 qPCR 进一步评估。靶基因的富集分析表明,miRNAs 在热应激与对照奶牛乳腺中的表达差异主要与 Wnt、TGF-β、MAPK、Notch 和 JAK-STAT 的调控有关。

结论

这些数据表明,本研究中鉴定的差异表达 miRNAs 可能在热应激过程中作为主要的调控因子发挥作用。我们可以通过上调或下调这些差异表达的 miRNAs 来减少荷斯坦奶牛的热应激损伤。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8d01/6309072/3a1330c53c51/12864_2018_5298_Fig1_HTML.jpg

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