Department of Biology Education, Kyungpook National University, Daegu 41566, Korea.
School of Life Sciences, BK21 Plus KNU Creative BioResearch Group, Kyungpook National University, Daegu 41566, Korea.
Mol Cells. 2019 Jan 31;42(1):56-66. doi: 10.14348/molcells.2018.0377. Epub 2019 Jan 2.
Histidine triad nucleotide-binding protein (HINT) is a member of the histidine triad (HIT) superfamily, which has hydrolase activity owing to a histidine triad motif. The HIT superfamily can be divided to five classes with functions in galactose metabolism, DNA repair, and tumor suppression. HINTs are highly conserved from archaea to humans and function as tumor suppressors, translation regulators, and neuropathy inhibitors. Although the structures of HINT proteins from various species have been reported, limited structural information is available for fungal species. Here, to elucidate the structural features and functional diversity of HINTs, we determined the crystal structure of HINT from the pathogenic fungus (CaHINT) in complex with zinc ions at a resolution of 2.5 Å. Based on structural comparisons, the monomer of CaHINT overlaid best with HINT protein from the protozoal species . Additionally, structural comparisons with human HINT revealed an additional helix at the C-terminus of CaHINT. Interestingly, the extended C-terminal helix interacted with the N-terminal loop (α1-β1) and with the α3 helix, which appeared to stabilize the dimerization of CaHINT. In the C-terminal region, structural and sequence comparisons showed strong relationships among 19 diverse species from archea to humans, suggesting early separation in the course of evolution. Further studies are required to address the functional significance of variations in the C-terminal region. This structural analysis of CaHINT provided important insights into the molecular aspects of evolution within the HIT superfamily.
组氨酸三联核苷酸结合蛋白(HINT)是组氨酸三联体(HIT)超家族的成员,由于存在组氨酸三联体基序,该超家族具有水解酶活性。HIT 超家族可以分为五个类别,其功能涉及半乳糖代谢、DNA 修复和肿瘤抑制。从古菌到人,HINT 高度保守,作为肿瘤抑制因子、翻译调节剂和神经病变抑制剂发挥作用。尽管已经报道了来自各种物种的 HINT 蛋白的结构,但有关真菌物种的结构信息有限。在这里,为了阐明 HINT 的结构特征和功能多样性,我们确定了致病真菌 (CaHINT)与锌离子复合物的 HINT 晶体结构,分辨率为 2.5Å。基于结构比较,单体 CaHINT 与原生动物物种的 HINT 蛋白最佳重叠。此外,与人类 HINT 的结构比较显示 CaHINT 的 C 末端有一个额外的螺旋。有趣的是,延伸的 C 末端螺旋与 N 末端环(α1-β1)和 α3 螺旋相互作用,这似乎稳定了 CaHINT 的二聚化。在 C 末端区域,结构和序列比较显示出 19 个来自古菌到人等不同物种之间的强烈关系,表明在进化过程中早期分离。需要进一步的研究来阐明 C 末端区域变异的功能意义。对 CaHINT 的结构分析为 HIT 超家族的分子进化提供了重要的见解。