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[中国丹江口水库河岸缓冲带根际细菌群落的组成及预测功能分析]

[Composition and Predictive Functional Analysis of Rhizosphere Bacterial Communities in Riparian Buffer Strips in the Danjiangkou Reservoir, China].

作者信息

Sun Feng, Tian Wei, Zhang Fei, Chen Yan, Ren Xue-Min, Pang Fa-Hu, Li Yu-Ying, Yao Lun-Guang, Chen Zhao-Jin

机构信息

Collaborative Innovation Center of Water Security for Water Source Region of Mid-route Project of South-North Water Diversion of Henan Province, School of Agricultural Engineering, Nanyang Normal University, Nanyang 473061, China.

Nanjing Institute of Environmental Sciences, Ministry of Environmental Protection, Nanjing 210042, China.

出版信息

Huan Jing Ke Xue. 2019 Jan 8;40(1):421-429. doi: 10.13227/j.hjkx.201805086.

Abstract

Microbial communities play crucial roles in the global biogeochemical nitrogen cycle. To our knowledge, the compositions and functions of rhizosphere communities in riparian buffer strips have not been reported. In this study, rhizosphere soil samples were collected from herbs ( and ), trees (), and shrubs () in the Danjiangkou Reservoir in June 2017. High-throughput sequencing was performed to analyze the community structure and diversity of bacteria. Phylogenetic analysis based on 16S rDNA sequences shows that the bacterial communities can be divided into 31 major phylogenetic groups. The dominant phylogenetic groups include Proteobacteria, Bacteroidetes, Actinobacteria, Gemmatimonadetes, and Acidobacteria. Phylogenetic investigation of communities by reconstruction of unobserved states (PICRUSt) was used to determine the metabolic and functional abilities of the observed bacterial communities. Our results reveal a wide genetic diversity of organisms involved in various essential processes such as biosynthesis of other secondary metabolites, transcription, Glycan biosynthesis and metabolism, cell growth and death, and carbohydrate metabolism. Based on the 16S rRNA gene copy number of the detected phylotype, the bacterial rhizospheres of plants in riparian buffer strips can be ranked as follows: > > > . We analyzed the differences of different plants from the perspective of bacterial community composition and function and provide a foundation for vegetation construction and water environmental protection in riparian buffer strips of the Danjiangkou Reservoir.

摘要

微生物群落对全球生物地球化学氮循环起着至关重要的作用。据我们所知,河岸缓冲带根际群落的组成和功能尚未见报道。本研究于2017年6月从丹江口水库的草本植物(和)、乔木()和灌木()中采集根际土壤样本。采用高通量测序技术分析细菌群落结构和多样性。基于16S rDNA序列的系统发育分析表明,细菌群落可分为31个主要的系统发育类群。优势系统发育类群包括变形菌门、拟杆菌门、放线菌门、芽单胞菌门和酸杆菌门。通过未观察状态重建对群落进行系统发育研究(PICRUSt),以确定观察到的细菌群落的代谢和功能能力。我们的结果揭示了参与各种基本过程的生物具有广泛的遗传多样性,这些过程包括其他次生代谢产物的生物合成、转录、聚糖生物合成与代谢、细胞生长与死亡以及碳水化合物代谢。根据检测到的系统发育型的16S rRNA基因拷贝数,河岸缓冲带植物的细菌根际可按以下顺序排列:> > > 。我们从细菌群落组成和功能的角度分析了不同植物之间的差异,为丹江口水库河岸缓冲带的植被建设和水环境保护提供了依据。

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