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Genomic analysis of three Clostridioides difficile isolates from urban water sources.

作者信息

Numberger Daniela, Riedel Thomas, McEwen Gayle, Nübel Ulrich, Frentrup Martinique, Schober Isabel, Bunk Boyke, Spröer Cathrin, Overmann Jörg, Grossart Hans-Peter, Greenwood Alex D

机构信息

Leibniz Institute for Zoo and Wildlife Research, Alfred-Kowalke-Strasse 17, 10315, Berlin, Germany.

Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures, Inhoffenstrasse 7B, 38124, Braunschweig, Germany.

出版信息

Anaerobe. 2019 Apr;56:22-26. doi: 10.1016/j.anaerobe.2019.01.002. Epub 2019 Jan 8.

DOI:10.1016/j.anaerobe.2019.01.002
PMID:30633971
Abstract

We investigated inflow of a wastewater treatment plant and sediment of an urban lake for the presence of Clostridioides difficile by cultivation and PCR. Among seven colonies we sequenced the complete genomes of three: two non-toxigenic isolates from wastewater and one toxigenic isolate from the urban lake. For all obtained isolates, a close genomic relationship with human-derived isolates was observed.

摘要

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